Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20arizonae_20[refseq_20GCF_5F001654025.1_202016-05-09] 3,178 sequences; 141,386,800 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq2 138 1e-27 >seq2 Length=27840087 Score = 138 bits (152), Expect = 1e-27 Identities = 188/263 (71%), Gaps = 6/263 (2%) Strand=Plus/Plus Query 145683 CAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCC 145742 |||||| | ||| || ||| |||||||| || || ||||| |||| || || || Sbjct 14040414 CAGGGGATTCACATGATTGTTATAGACGTGAGCATCGCCCAGTGTATGGACAAAATCGCC 14040473 Query 145743 GGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTT 145802 ||| | | |||||| | ||||||| ||||||||||| || || || ||| ||||| Sbjct 14040474 GGGTTTTAAGCCCGTCACATGGGCGATCATGTAGGTCAACAAGGCATACGAGGCGATGTT 14040533 Query 145803 GAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCC 145862 ||| ||||| ||||| |||||||| | |||||| ||||| |||||||| | || || Sbjct 14040534 GAAAGGCACTCCCAGACCCATGTCGGCGCTGCGCTGATACAGTTGGCAGGACAATTCACC 14040593 Query 145863 GCCCGCC------ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGG 145916 | || | || |||||||| |||| |||||| ||||||| ||||| ||| Sbjct 14040594 ACGCGACTGCGATACATAGAACTGCGCCAGGCAGTGGCACGGCGGCAACGCCATTTGGGG 14040653 Query 145917 CAGGTCCGCCGGGTTCCAGGCGG 145939 | |||| || |||||||||| Sbjct 14040654 TATGTCCAAAGGATTCCAGGCGG 14040676 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590053359199120