Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20arizonae_20[refseq_20GCF_5F001654025.1_202016-05-09] 3,178 sequences; 141,386,800 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq4 109 8e-19 >seq4 Length=23952536 Score = 109 bits (120), Expect = 8e-19 Identities = 172/251 (69%), Gaps = 0/251 (0%) Strand=Plus/Minus Query 202760 ACATCAAATTTACGTCTACATCCTTCATAACTCATATATCTAATTTTACCAAATATTGGT 202819 |||||||| || || | || |||| ||| ||||||| | ||| ||||||||||| | Sbjct 633404 ACATCAAACTTTCGCTTGCAGCCTTGATAGTTCATATAGCGAATCTTACCAAATATCGCG 633345 Query 202820 CTTTCTTTCCATGCTCTATCATGAATACCACAAATTGACCACATACATCCAACATATCCA 202879 | || ||||| || || ||||| |||| || |||||||| || ||||| || ||| Sbjct 633344 CGCTCCTTCCAACCTTGGTCGTGAATCCCACCGATGGACCACATGCAACCAACGTAGCCA 633285 Query 202880 TTTGGATCACGTCCATCTATAAAATATTTATCATTTAAATNNNNNNNNNNNNNNAATGCT 202939 || |||||||||||||| | | || || || || || | || Sbjct 633284 TTCGGATCACGTCCATCCAGACTGTACTTGTCGTTCAATAATATGCTATACTCAAGCGCC 633225 Query 202940 TCTTCTGGTGATTTTGTCCATTCTAATAtttttttAGCCCAATACATTCTTAAATATCCA 202999 | ||| || | || ||||| ||||| || ||||| ||||||||||| | | | | || Sbjct 633224 TGTTCCGGCGTTTCGGTCCACTCTAAAATCTTTTTGGCCCAATACATGCGCAGAAACCCG 633165 Query 203000 TGCATTTTACC 203010 |||||||| || Sbjct 633164 TGCATTTTGCC 633154 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755425989510400