Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20arizonae_20[refseq_20GCF_5F001654025.1_202016-05-09]
3,178 sequences; 141,386,800 total letters
Query= NC_001993.1
Length=236120
Score E
Sequences producing significant alignments: (Bits) Value
seq4 109 8e-19
>seq4
Length=23952536
Score = 109 bits (120), Expect = 8e-19
Identities = 172/251 (69%), Gaps = 0/251 (0%)
Strand=Plus/Minus
Query 202760 ACATCAAATTTACGTCTACATCCTTCATAACTCATATATCTAATTTTACCAAATATTGGT 202819
|||||||| || || | || |||| ||| ||||||| | ||| ||||||||||| |
Sbjct 633404 ACATCAAACTTTCGCTTGCAGCCTTGATAGTTCATATAGCGAATCTTACCAAATATCGCG 633345
Query 202820 CTTTCTTTCCATGCTCTATCATGAATACCACAAATTGACCACATACATCCAACATATCCA 202879
| || ||||| || || ||||| |||| || |||||||| || ||||| || |||
Sbjct 633344 CGCTCCTTCCAACCTTGGTCGTGAATCCCACCGATGGACCACATGCAACCAACGTAGCCA 633285
Query 202880 TTTGGATCACGTCCATCTATAAAATATTTATCATTTAAATNNNNNNNNNNNNNNAATGCT 202939
|| |||||||||||||| | | || || || || || | ||
Sbjct 633284 TTCGGATCACGTCCATCCAGACTGTACTTGTCGTTCAATAATATGCTATACTCAAGCGCC 633225
Query 202940 TCTTCTGGTGATTTTGTCCATTCTAATAtttttttAGCCCAATACATTCTTAAATATCCA 202999
| ||| || | || ||||| ||||| || ||||| ||||||||||| | | | | ||
Sbjct 633224 TGTTCCGGCGTTTCGGTCCACTCTAAAATCTTTTTGGCCCAATACATGCGCAGAAACCCG 633165
Query 203000 TGCATTTTACC 203010
|||||||| ||
Sbjct 633164 TGCATTTTGCC 633154
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 755425989510400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |