Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20arizonae_20[refseq_20GCF_5F001654025.1_202016-05-09]
3,178 sequences; 141,386,800 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq4 154 3e-32
>seq4
Length=23952536
Score = 154 bits (170), Expect = 3e-32
Identities = 301/442 (68%), Gaps = 7/442 (2%)
Strand=Plus/Minus
Query 101919 TTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGGA 101978
|||| || ||||| || || ||||||||||||||||| || || || || || |||
Sbjct 3358597 TTGCGTTCGCTGCCGTGGAGGGAATCTTCTTTAGTGGCAGCTTTGCCTCGATCTTTTGGC 3358538
Query 101979 TCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGACG 102038
| ||||| | ||| | |||| ||||| |||| |||||||||||| || || | ||||
Sbjct 3358537 TGAAGAAACGTGGTCTGATGCCCGGTCTGACCTTCTCCAATGAGTTGATCTCACGCGACG 3358478
Query 102039 AAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATAC--CCC 102096
| || | ||| | |||||||| ||| |||| || |||| || || ||
Sbjct 3358477 AGGGCTTGCATTGTGACTTTGCTGTGATGATGTTCC----GGCATTTGGTGCAACGTCCT 3358422
Query 102097 ATCAAGAGAAAGGATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAACAAGAATTTCT 102156
| | | || | || |||| || || |||| || || ||||| ||||| |||||
Sbjct 3358421 AGCC-GTGAGCGCATCATTGAGATCATCTCTGATGCTGTTACCATTGAGCAAGAGTTTCT 3358363
Query 102157 CACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTACAT 102216
||||| | | ||||| || ||||| | || ||||| || |||||| | |||| ||
Sbjct 3358362 CACAGATGCTCTGCCCGTCAAATTGATTGGCATGAATTGTGCATTGATGTCCGAGTATAT 3358303
Query 102217 TGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAGCACTATAATGTTAC 102276
||||||||| || ||| || ||||| ||| | || | | || ||| ||| |
Sbjct 3358302 TGAATTTGTTGCGGATCGTCTGTTGGTGGAACTCGGTGTTGGCAAAATCTACAATACGAA 3358243
Query 102277 CAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTTGAAAA 102336
|| || ||| | || ||||| | || || || || ||||| ||||| || || ||
Sbjct 3358242 GAATCCATTCACCTTTATGGAGATGATCTCGCTGGATGGCAAGACTAACTTCTTCGAGAA 3358183
Query 102337 GAGAGTCGCCGAGTATCAACGT 102358
| ||| | ||| |||||||||
Sbjct 3358182 AAAAGTTGGCGAATATCAACGT 3358161
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989543705994990
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |