Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20arizonae_20[refseq_20GCF_5F001654025.1_202016-05-09]
3,178 sequences; 141,386,800 total letters
Query= NC_003401.1
Length=133719
Score E
Sequences producing significant alignments: (Bits) Value
seq2 123 2e-23
>seq2
Length=27840087
Score = 123 bits (136), Expect = 2e-23
Identities = 285/427 (67%), Gaps = 18/427 (4%)
Strand=Plus/Plus
Query 20921 CAGCAGGGGATCAACGTGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGTGCACAAAGTC 20980
||||||||||| || || ||||| || ||||| || || |||| || || ||||| ||
Sbjct 14040411 CAGCAGGGGATTCACATGATTGTTATAGACGTGAGCATCGCCCAGTGTATGGACAAAATC 14040470
Query 20981 TCCCGGGGTCAGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGAT 21040
|| || | | |||||| || || ||||||| || |||| | ||| || ||||||
Sbjct 14040471 GCCGGGTTTTAAGCCCGTCACATGGGCGATCATGTAGGTCAACAAGGCATACGAGGCGAT 14040530
Query 21041 GTTAAACGGGACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTC 21100
||| || || || || || |||||||||||| | ||| ||||| |||||||||| ||
Sbjct 14040531 GTTGAAAGGCACTCCCAGACCCATGTCGGCGCTGCGCTGATACAGTTGGCAGGACAATTC 14040590
Query 21101 CCCCCGAGCC------ACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCATCCG 21154
|| || | | || || ||||| || ||| || || || | ||||| |
Sbjct 14040591 ACCACGCGACTGCGATACATAGAACTGCGCCAGGCAGTGGCACGGCGGCAACGCCATTTG 14040650
Query 21155 CGCGAGGTCCGCGGGGTTCCACGCGCACATAACGATGCGCCGATCGTGGGGCCGCCTGTT 21214
| | |||| || ||||| ||| |||| | |||||| ||||| | | | ||||
Sbjct 14040651 GGGTATGTCCAAAGGATTCCAGGCGGACATTATGATGCGACGATC---CGCCGGATTGTT 14040707
Query 21215 ---AATTAGATCCACCACGTAACGCAGCTGGTCCACCCCCTGACCCTCGTAGTTGGCGTC 21271
|| ||| | || | |||||| || | ||||| || ||||| ||||
Sbjct 14040708 GCGTATAGTATCGATGACCTGTTTCAGCTGATCAATACCCTGGCCGGTGTAGT---CGTC 14040764
Query 21272 GGCCC---CCCTGTACTCCGCCCCAAAATGTCTCCACTGGAACCCGTACACCGGCCCCAG 21328
|| | | || | || ||||| || | ||||||||| || || ||||| |||||
Sbjct 14040765 GGTGCATTTACCATATTTTGCGCCAAAGTGACGCCACTGGAAGCCATATACCGGACCCAG 14040824
Query 21329 ATCGCCC 21335
||| |||
Sbjct 14040825 ATCACCC 14040831
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427759431433440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |