Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20arizonae_20[refseq_20GCF_5F001654025.1_202016-05-09] 3,178 sequences; 141,386,800 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq1 84.2 2e-11 >seq1 Length=29979347 Score = 84.2 bits (92), Expect = 2e-11 Identities = 114/154 (74%), Gaps = 4/154 (3%) Strand=Plus/Minus Query 33565 CGCATACCAGAGATGGGCGACAAGTTTGCATCGT-TCACGGCCCAGAAGGGCACGTGCGG 33623 ||||||||| |||| ||||||||||| || || |||||| | ||||||| || || || Sbjct 11908524 CGCATACCACAGATTGGCGACAAGTTCGCCTCTCGTCACGGGC-AGAAGGGAACATGTGG 11908466 Query 33624 CATGATGTA-CGACCAGTGGGACATGCCGTTCACGGCCGACGGCGTGGTCCCGGACCTAG 33682 ||| ||| |||| || ||||||||||||||| ||| || ||| || || | Sbjct 11908465 CATCCAGTATCGAC-AGGAGGACATGCCGTTCACCTGCGAGGGATTGGCGCCAGATATTA 11908407 Query 33683 TCATCAACCCGCATGCGTTCCCCTCGCGCATGAC 33716 ||||||| || || || | ||||| || ||||| Sbjct 11908406 TCATCAATCCCCACGCCATTCCCTCTCGTATGAC 11908373 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356219802404734