Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20arizonae_20[refseq_20GCF_5F001654025.1_202016-05-09]
3,178 sequences; 141,386,800 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq2 86.0 5e-12
>seq2
Length=27840087
Score = 86.0 bits (94), Expect = 5e-12
Identities = 147/211 (70%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCA-ATTGTCGCTCGTCCT 48575
||| || || | ||| |||||| ||||||||||| || | || | || || | ||||
Sbjct 185580 CACCAAGTGCAAAGTGGACTCCTTCTGAATGTTGTAGTCGGACAGAGTG-CGTCCATCCT 185522
Query 48576 CCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCA 48635
|||||||||| ||| || | || | |||||||||||| || | | || |||||
Sbjct 185521 CCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGTGGGATTCCCTCTTTGTCTT 185462
Query 48636 TAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTT 48695
|| || ||||| | | | ||||| || | | ||| ||| | || ||||| |
Sbjct 185461 GGATCTTGGCCTTGACATTCTCGATGGTGTCAGAGGGCTCGACCTCCAAAGTAATGGTCT 185402
Query 48696 TACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
| |||||||||||||| || || || |||||
Sbjct 185401 TGCCGGTGAGAGTTTTAACGAAGATTTGCAT 185371
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421234884151178
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |