Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20arizonae_20[refseq_20GCF_5F001654025.1_202016-05-09] 3,178 sequences; 141,386,800 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq2 86.0 5e-12 >seq2 Length=27840087 Score = 86.0 bits (94), Expect = 5e-12 Identities = 147/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCA-ATTGTCGCTCGTCCT 48575 ||| || || | ||| |||||| ||||||||||| || | || | || || | |||| Sbjct 185580 CACCAAGTGCAAAGTGGACTCCTTCTGAATGTTGTAGTCGGACAGAGTG-CGTCCATCCT 185522 Query 48576 CCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCA 48635 |||||||||| ||| || | || | |||||||||||| || | | || ||||| Sbjct 185521 CCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGTGGGATTCCCTCTTTGTCTT 185462 Query 48636 TAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTT 48695 || || ||||| | | | ||||| || | | ||| ||| | || ||||| | Sbjct 185461 GGATCTTGGCCTTGACATTCTCGATGGTGTCAGAGGGCTCGACCTCCAAAGTAATGGTCT 185402 Query 48696 TACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 | |||||||||||||| || || || ||||| Sbjct 185401 TGCCGGTGAGAGTTTTAACGAAGATTTGCAT 185371 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421234884151178