Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20arizonae_20[refseq_20GCF_5F001654025.1_202016-05-09]
3,178 sequences; 141,386,800 total letters
Query= NC_009333.1
Length=137969
Score E
Sequences producing significant alignments: (Bits) Value
seq2 109 5e-19
>seq2
Length=27840087
Score = 109 bits (120), Expect = 5e-19
Identities = 407/629 (65%), Gaps = 12/629 (2%)
Strand=Plus/Plus
Query 20135 GGAAAGGGACGTGGAGTGCGCGTCAGCTGCAGCCGTAGTGGCTCTATATGCGTTTTGTAG 20194
|| ||||||||||| || ||| |||| | | || || | | ||| | || |||
Sbjct 14040379 GGGAAGGGACGTGGTTCACGTTTCATCTGCTCCAGCAGGGGATTCACATGATTGTTATAG 14040438
Query 20195 ATGTGGGCATCTCCCAACGTGTGAATAAACTCCCCGGGTCTAAGACCAGTAACATGAGCA 20254
| ||| ||||| |||| || || | ||| || |||||| | | || || ||||| ||
Sbjct 14040439 ACGTGAGCATCGCCCAGTGTATGGACAAAATCGCCGGGTTTTAAGCCCGTCACATGGGCG 14040498
Query 20255 AGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCCATGTCT 20314
| ||| || || || | || ||| ||| ||||| ||||| ||||||| |||||||||
Sbjct 14040499 ATCATGTAGGTCAACAAGGCATACGAGGCGATGTTGAAAGGCACTCCCAGACCCATGTCG 14040558
Query 20315 CCCGACCTCTGATACAGCTGACAGGAAAGCTCAC----CGTCAGC--TACATAAAATTGA 20368
| | ||||||||| || ||||| | |||| || | || |||||| || ||
Sbjct 14040559 GCGCTGCGCTGATACAGTTGGCAGGACAATTCACCACGCGACTGCGATACATAGAACTGC 14040618
Query 20369 CATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTTCCACGCACAC 20428
| |||| || ||||| | |||||| | | |||| || ||||| || ||
Sbjct 14040619 GCCAGGCAGTGGCACGGCGGCAACGCCATTTGGGGTATGTCCAAAGGATTCCAGGCGGAC 14040678
Query 20429 ATAATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCACAATGTACGACAATTGG 20488
|| ||||| | | ||| |||||| || ||| ||| | | | || ||
Sbjct 14040679 ATTATGATGCGACGATCCGCCGGATTGTTGCGTATAGTATCGATGACCTGTTTCAGCTGA 14040738
Query 20489 TCAAACCCCTGGCCTGTATAGTCAGC-ATCCGCGTCCACGTACGCCGCCCCAAAGTGCCT 20547
|||| |||||||| || ||||| | | | | | | || || |||||||| |
Sbjct 14040739 TCAATACCCTGGCCGGTGTAGTCGTCGGTGCATTTAC-CATATTTTGCGCCAAAGTGACG 14040797
Query 20548 CCACTGGAAACCGTAAACAGGTCCCAAATCCCCCTCCCTTCTGTGCGCCAGGCCGCGCCC 20607
||||||||| || || || || |||| ||| ||| || | | || |||| |
Sbjct 14040798 CCACTGGAAGCCATATACCGGACCCAGATCACCCACCTCGCGATCCGTGTGGCCACATTT 14040857
Query 20608 GGCCAGGAACTCCCTGGAGCCATTTTTGTCCCATATCTTGAC-TCCTGTTCTTGAAAGCT 20666
| | || ||||| | || || ||| |||||||| | || | || || || | | |
Sbjct 14040858 GTCGAGAAACTCGCGGGTGCTATTACCATCCCATATGTGTACATTCTTCTCCTGCAGGAT 14040917
Query 20667 CCCTGGAGTCAGTACTCCCCTTC-AGAAACCAAAGCAGCTCTTGCACTACGCCTCGCCAA 20725
| || | || || || ||| | | ||||| | |||||| | | ||||| || |
Sbjct 14040918 CTTTGCA-TCTGT-CTGCCCAGCAATGAACCAGATCAGCTCCTCGGCCACGCCCCGAAAG 14040975
Query 20726 AACACCCGCTTTGTGGTTAGTAAGGGAAA 20754
|| || ||||| ||||| || ||||| ||
Sbjct 14040976 AAGACGCGCTTGGTGGTCAGCAAGGGGAA 14041004
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 441355266465520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |