Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20arizonae_20[refseq_20GCF_5F001654025.1_202016-05-09]
3,178 sequences; 141,386,800 total letters
Query= NC_009503.1
Length=124121
Score E
Sequences producing significant alignments: (Bits) Value
seq4 91.5 1e-13
seq3 91.5 1e-13
>seq4
Length=23952536
Score = 91.5 bits (100), Expect = 1e-13
Identities = 187/271 (69%), Gaps = 9/271 (3%)
Strand=Plus/Plus
Query 37831 ACGATCTCTTGTGGAACGCGGCTCAAATTCAGCTTGTGCGCGAGGGTAAGATGCATCAGT 37890
||||||| ||||||| |||| || | ||||| || || || || ||||| ||
Sbjct 633113 ACGATCT---GTGGAACTCGGCCCAGCTGCAGCTGGTCAAGGAAGGCAAAATGCACGGGT 633169
Query 37891 ATATGCGCATGTATTGGTGCAAGAAAATTTTGGAATGGTCTGATGATGCTCAGACC--GC 37948
| |||||||||||||| ||| || ||||| || ||| | || | || | || | ||
Sbjct 633170 TTCTGCGCATGTATTGGGCCAAAAAGATTTTAGAGTGGACCGA-AACGC-CGGAACAGGC 633227
Query 37949 GCTCAACTACGCCAT-TTATCTCAATGATAAGTACAGCTTGGACGGGCGTGATCCCAACG 38007
||| | || ||| |||| | || || |||||||| |||| || |||||||| || |
Sbjct 633228 GCTTGAGTATAGCATATTAT-TGAACGACAAGTACAGTCTGGATGGACGTGATCCGAATG 633286
Query 38008 GTTACGTCGGCTGTTTGTGGTCTATATGCGGGCTACACGATAGAGCCTGGCGCGAGATTC 38067
| ||||| || || ||||||| || | ||| | ||||| || ||| |||
Sbjct 633287 GCTACGTTGGTTGCATGTGGTCCATCGGTGGGATTCACGACCAAGGTTGGAAGGAGCGCG 633346
Query 38068 CCATTTACGGCAAGATTCGGTACATGAACTA 38098
| || | || |||||||| || ||||||||
Sbjct 633347 CGATATTTGGTAAGATTCGCTATATGAACTA 633377
>seq3
Length=22052390
Score = 91.5 bits (100), Expect = 1e-13
Identities = 89/115 (77%), Gaps = 0/115 (0%)
Strand=Plus/Minus
Query 33899 AACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTG 33958
|||| || | ||| ||||| |||| |||||| || |||||| |||||||||||||| |
Sbjct 1975461 AACCGCCACGCAGACGCAGTACCAAATGAAGGGTAGACTCCTTTTGAATGTTGTAATCGG 1975402
Query 33959 CCAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATC 34013
|| || | || |||| |||||||||||| || ||||| |||||||||||
Sbjct 1975401 ACAGGGTGCGACCATCTTCCAGTTGCTTGCCGGCGAAGATCAGACGCTGCTGATC 1975347
Score = 84.2 bits (92), Expect = 2e-11
Identities = 87/114 (76%), Gaps = 0/114 (0%)
Strand=Plus/Minus
Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959
||| || | ||| || || ||||||||||| || ||||||||| || ||||| || |
Sbjct 1975172 ACCACCACGCAGACGGAGGACCAGATGAAGGGTCGACTCCTTCTGGATATTGTAGTCAGA 1975113
Query 33960 CAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATC 34013
||| || | || |||| |||||||||||| || ||||| |||||||||||
Sbjct 1975112 CAAGGTGCGGCCATCTTCCAGTTGCTTGCCGGCGAAGATCAGACGCTGCTGATC 1975059
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397047021028756
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |