Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20arizonae_20[refseq_20GCF_5F001654025.1_202016-05-09]
3,178 sequences; 141,386,800 total letters
Query= NC_011423.1
Length=111724
Score E
Sequences producing significant alignments: (Bits) Value
seq2 98.7 7e-16
seq3 84.2 2e-11
>seq2
Length=27840087
Score = 98.7 bits (108), Expect = 7e-16
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027
|| || || | ||| || |||||||| |||||||| ||| ||| | | | |||||
Sbjct 14207464 ACCAAGTGCAAGGTTGACTCTTTTTGGATGTTGTAGTCGGAAAGAGTGCGACCATCTTCC 14207523
Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087
||||| |||||||| | || | |||||| || || ||||||||||| |||||
Sbjct 14207524 AATTGCTTGCCAGCAAAGATTAGACGCTGCTGATCTGGAGGAATTCCTTCTTTGTCCTGG 14207583
Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147
|| ||| ||| ||| | || || ||||| ||| || || | || ||||| |||
Sbjct 14207584 ATCTTGGCTTTGACATTCTCGATGGTATCCGACGGTTCGACCTCAAGAGTGATGGTCTTA 14207643
Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCAT 15176
|| || || ||||| ||||| || |||||
Sbjct 14207644 CCCGTTAGGGTTTTAACAAAGATCTGCAT 14207672
>seq3
Length=22052390
Score = 84.2 bits (92), Expect = 2e-11
Identities = 88/116 (76%), Gaps = 0/116 (0%)
Strand=Plus/Minus
Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027
|| |||||||||||||| || ||||| |||||||||||| || | | | |||||
Sbjct 1975441 ACCAAATGAAGGGTAGACTCCTTTTGAATGTTGTAATCGGACAGGGTGCGACCATCTTCC 1975382
Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTC 15083
| ||| ||||| ||| | |||| |||||| || || ||||| |||||||||||
Sbjct 1975381 AGTTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGAATACCTTCCTTGTC 1975326
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 357378157537730
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |