Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20arizonae_20[refseq_20GCF_5F001654025.1_202016-05-09]
3,178 sequences; 141,386,800 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq2 100 3e-16
>seq2
Length=27840087
Score = 100 bits (110), Expect = 3e-16
Identities = 188/270 (70%), Gaps = 6/270 (2%)
Strand=Plus/Plus
Query 175900 TGTGAAGATGTACCT--CGTTTGAGACGCATCTTTGCCACCCATGAGACGCGTCCCAAAT 175957
|||||||||||| | || ||| || |||||| ||||| | | ||| || || ||
Sbjct 27135029 TGTGAAGATGTAACGAGCGCTTGC-ACA-ATCTTTACCACCGGTCAAACGTGTGCCGAAC 27135086
Query 175958 TGACCACATGGCTCAAGGAGATTGATATTGTTTGAGCCCATATAGTCATTCGCCAACTTG 176017
||||| | || || || | |||||||||||| || || | | | | | |||||| ||
Sbjct 27135087 TGACCGCGAGGTTCCAGCAAATTGATATTGTTCGATCCGACAAAATTCTGCGCCAAATTT 27135146
Query 176018 ACAATCGT-ATCCGCGAGGGAGACTTCACCGTGATGGTAGGCCGACTTGTCCGCCACATA 176076
|| || || ||| || ||||| | || ||||||||||| || ||| | || ||||| |
Sbjct 27135147 ACTATAGTCATCTGC-AGGGACATCTCGCCGTGATGGTATGCTGACATTTCGGCCACCGA 27135205
Query 176077 CGCCGCCAACTGCGCCACCTTCATCTCATCCTTGAGGTTCTTGTGGAAGCACGCATACAT 176136
| | | | ||| || || || | ||| |||| ||| | |||||||| | ||||
Sbjct 27135206 CCCGGATAGCTGAGCAACTTTAACCTCCCTCTTGTCGTTACGCTTGAAGCACGTAAACAT 27135265
Query 176137 GACCTTTCTCTGTGAAGGCTTGAGGCCGTC 176166
||||| | ||| |||||| ||||| ||
Sbjct 27135266 CACCTTACGCTGACCAGGCTTTAGGCCATC 27135295
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613482828426480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |