Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20arizonae_20[refseq_20GCF_5F001654025.1_202016-05-09]
3,178 sequences; 141,386,800 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq4 132 8e-26
>seq4
Length=23952536
Score = 132 bits (146), Expect = 8e-26
Identities = 522/810 (64%), Gaps = 26/810 (3%)
Strand=Plus/Plus
Query 159644 ACATTCTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAAT 159703
|| || |||||||| ||||| |||||||| |||| || || ||||| || ||||
Sbjct 3358177 ACTTTTTTCTCGAAGAAGTTAGTCTTGCCATCCAGCGAGATCATCTCCATAAAGGTGAAT 3358236
Query 159704 GGGTTCTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACA 159763
|| |||||| | ||| || || ||||| || ||| || | || || |||
Sbjct 3358237 GGATTCTTCGTATTGTAGATTTTGCCAACACCGAGTTCCACCAACAGACGATCCGCAACA 3358296
Query 159764 AATTCGATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCT 159823
||||| || || ||||| |||| || || || | || | ||||| || ||
Sbjct 3358297 AATTCAATATACTCGGACATCAATGCACAATTCATGCCAATCAATTTGACGGGCAGAGCA 3358356
Query 159824 TCCGACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGACACGTTCG 159883
|| | |||||||| | |||||| || || || | | |||| || || ||
Sbjct 3358357 TCTGTGAGAAACTCTTGCTCAATGGTAACAGCATCAGAGATGATCTCAATGATGCGCTCA 3358416
Query 159884 TACCCCGGC--TTGCCCAAAATGTGGTCCTTAAACAGGAGGCAC-GCAAAGTCGCAGTGC 159940
| || |||| | ||||| | |||| | ||| |||||||| || |||
Sbjct 3358417 CGGCTAGGACGTTGCACCAAATGCCGG-----AACATCAT-CACAGCAAAGTCACAATGC 3358470
Query 159941 AGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGC 160000
| |||||||| || ||||| ||||| ||||| | | | || || ||||| | |||||
Sbjct 3358471 AAGCCCTCGTCGCGTGAGATCAACTCATTGGAGAAGGTCAGACCGGGCATCAGACCACGT 3358530
Query 160001 GGTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCA 160060
|| |||||||| || | ||||| || ||||| ||||| ||||||||||| ||
Sbjct 3358531 TTCTTCAGCCAAAAGATCGAGGCAAAGCTGCCACTAAAGAAGATTCCCTCCACGGCAGCG 3358590
Query 160061 AACGCCACGAGCCTCTCACCAAA---AGAGGCGTTGGTGTCATG-GGTCCACCTTTTGGC 160116
||||| | || ||||| ||||| | || || | ||| |||| ||
Sbjct 3358591 AACGCAATGATTCTCTCGCCAAAGTTCGCCGCCTTCG----ATGAAATCCAAGAGAGCGC 3358646
Query 160117 CCATTCAGCCTTCTTTGC--GATGCACGGCATGCGCTCGACGGCGTTAAACAATCTGTCC 160174
||| || |||| || || || ||||| || | ||| || |||| |||
Sbjct 3358647 CCAATCGGCCT--TTCGCTTGACAGCGGGCATTGTTTCAATGGCATTGAACAGATAATCC 3358704
Query 160175 TGCTCCTTCACATCCTTGATCAGAGTAGCAATCAGCTTCGAGTACATTTCTGCGTGCACA 160234
| |||| |||| | || ||| | |||||| |||||| || | |||||||
Sbjct 3358705 CGTTCCTGTGGATCCCTAATATATGTATCGATCAGCACGCTGTACATCTCCGAGTGCACA 3358764
Query 160235 TTTTCGATGGCCATCTGAAAGTTGTAGAAATATGTCGCCTCCAGATA-CTGCACCTCCTG 160293
|| || ||||| || |||||| |||||| | | || | | || |||||||||||
Sbjct 3358765 TTCTCCATGGCGATTTGAAAGCCATAGAAACAACGAG-CTTCGGTTATTTGCACCTCCTG 3358823
Query 160294 TGTGAACCTTTGACCCAGATTGGCATTAACCAACCCGTCGGCGGCCGCAAAGAAAGCCAA 160353
|||| | | | ||||| ||||||| | || |||| ||| |||||||| || |
Sbjct 3358824 GCTGAAGCGCTCGACAAGATTCTCATTAACAATGCCATCGGAGGCGGCAAAGAAGGCGAG 3358883
Query 160354 CACGTGAGAGATGAAATGTCTCTCGTCTTTGTTGAGTCTCTTTTCCCAGTGTGTCACGTC 160413
||| || ||||| || || | ||||| | | | | | |||||| |||| |||
Sbjct 3358884 CACATGGGAGATAAAGTGACGCTCGTTATCAGTTAAAC---GTGCCCAGTCGGTCAAGTC 3358940
Query 160414 TTGGGCCAAATCAACCTCTTCCGCGCTCCA 160443
|| | | ||| ||||||||| | ||||
Sbjct 3358941 TTTAGAGAGATCCACCTCTTCCACAGTCCA 3358970
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795123612459680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |