Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20arizonae_20[refseq_20GCF_5F001654025.1_202016-05-09]
3,178 sequences; 141,386,800 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq2 111 2e-19
>seq2
Length=27840087
Score = 111 bits (122), Expect = 2e-19
Identities = 385/587 (66%), Gaps = 14/587 (2%)
Strand=Plus/Plus
Query 112072 AGGAGGCGCG--GTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGA 112128
|||||| || |||| |||||||| || | || | ||||| || ||||| || ||||
Sbjct 27784009 AGGAGGAGCATCGTGCACGCGATCTTTTTTTTGCATTGTGGATACCTGATCTTTTTATGA 27784068
Query 112129 AGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCT 112188
| | ||||| | | || | ||||| | | |||||| | || || || |||
Sbjct 27784069 AACGTGTTGAAGCTAATGAAGACTGGTCATTAATGTGTCCACATAAATGCCCTGGCCTCC 27784128
Query 112189 CCGATGCCGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGG 112248
| |||| |||||| || |||||| |||||| | || || || ||| | || |
Sbjct 27784129 CAGATGTTTGGGGTGAAGATTTTGAAAACCTCTATATCAAATATGAACGAGAGGGACGAG 27784188
Query 112249 CGACTGCGACGGTGCCA--GCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGA 112306
||| | ||| | | | ||| | | ||| || || | | |||||| ||
Sbjct 27784189 CGAAT-CGA-GTTATTAAGGCTCAATCTCTTTGGTTTGCCATCATTGAATCTCAAGTAGA 27784246
Query 112307 GACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAA 112366
||||||||| || || ||| | | || ||| | |||||| ||| || || ||| | ||
Sbjct 27784247 GACTGGTACTCCTTACATGTTATTTAAGGACTCTTGTAACAGAAAAAGCAACCAACAAAA 27784306
Query 112367 TTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGA 112426
| | || || || | || || || |||||||| | |||| | | | |||
Sbjct 27784307 TGTTGGAACTATAAAATGCAGTAATCTGTGCACAGAAATAGTTGAATATTCGGCACCAGA 27784366
Query 112427 TGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGAC 112486
||| | ||||||||||| | || || ||||| || | || ||| || ||| ||
Sbjct 27784367 TGAAATAGCTGTGTGTAATTTGGCGTCTATCGCACTTAATATGTTTGT-GACGCAG-GAG 27784424
Query 112487 AAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAA 112546
||| | | ||| | | |||| || | ||||| || |||| || || |||||| ||||
Sbjct 27784425 AAA-TCTTATGACTTTAAAAAGCTTAAAGAAGTAACTAAAATCGTTACGAAAAACTTAAA 27784483
Query 112547 CAGAGTTATTGATAGAAATTTTTACCCCGTTG--AGACTGCTCGTAAATCTAATATGAGA 112604
| | | ||||||| ||||| || ||| ||| ||| ||| ||||| ||| | |
Sbjct 27784484 TAAAATAATTGATATAAATTACTA-CCCTTTGCCAGA-AGCTAAAAAATCAAATTTACGT 27784541
Query 112605 CACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCAT 112651
|||||||| |||||| | || |||||||| | ||||| | ||| ||
Sbjct 27784542 CACCGTCCTATTGGTATTGGAGTCCAAGGGTTTGCGGACGCATTAAT 27784588
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620717741008160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |