Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20arizonae_20[refseq_20GCF_5F001654025.1_202016-05-09] 3,178 sequences; 141,386,800 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq3 86.0 7e-12 >seq3 Length=22052390 Score = 86.0 bits (94), Expect = 7e-12 Identities = 159/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 9366 CCCACGGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCA 9425 ||||| || || || || |||||||| | ||| || || || | || || || || Sbjct 3101515 CCCACAGCGTCGATTTCGTCAATGAACAAAATGCAGGGCGCATGCTTTCGTGCCATGGCA 3101456 Query 9426 AAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCG 9485 || | |||||| || | | ||||| || ||||||||||||| ||| | | | || Sbjct 3101455 AACATATCGCGCACTCGGGACGGACCCACGCCGACAAACATCTCCAGAAACTCCGAGCCG 3101396 Query 9486 GA-ACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTT 9544 || || | ||||||||| ||||| | || || || |||| ||| || ||||| || Sbjct 3101395 GAGACGGT-GATGAAGGGCACATTCGCCTCGCCAGCTGTGGCCTTGGCCAGCAGAGTTTT 3101337 Query 9545 ACCCGTACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCC 9595 ||| ||||| ||| ||| | | | ||||||| || || |||||||| Sbjct 3101336 ACCAGTACCGGGCGGACCGGTCAACATGGCACCCTTCGGTATTTTGGCGCC 3101286 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589957363012720