Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20arizonae_20[refseq_20GCF_5F001654025.1_202016-05-09]
3,178 sequences; 141,386,800 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq3 86.0 7e-12
>seq3
Length=22052390
Score = 86.0 bits (94), Expect = 7e-12
Identities = 159/231 (69%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 9366 CCCACGGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCA 9425
||||| || || || || |||||||| | ||| || || || | || || || ||
Sbjct 3101515 CCCACAGCGTCGATTTCGTCAATGAACAAAATGCAGGGCGCATGCTTTCGTGCCATGGCA 3101456
Query 9426 AAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCG 9485
|| | |||||| || | | ||||| || ||||||||||||| ||| | | | ||
Sbjct 3101455 AACATATCGCGCACTCGGGACGGACCCACGCCGACAAACATCTCCAGAAACTCCGAGCCG 3101396
Query 9486 GA-ACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTT 9544
|| || | ||||||||| ||||| | || || || |||| ||| || ||||| ||
Sbjct 3101395 GAGACGGT-GATGAAGGGCACATTCGCCTCGCCAGCTGTGGCCTTGGCCAGCAGAGTTTT 3101337
Query 9545 ACCCGTACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCC 9595
||| ||||| ||| ||| | | | ||||||| || || ||||||||
Sbjct 3101336 ACCAGTACCGGGCGGACCGGTCAACATGGCACCCTTCGGTATTTTGGCGCC 3101286
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589957363012720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |