Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20arizonae_20[refseq_20GCF_5F001654025.1_202016-05-09]
3,178 sequences; 141,386,800 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq4 174 3e-38
>seq4
Length=23952536
Score = 174 bits (192), Expect = 3e-38
Identities = 353/524 (67%), Gaps = 0/524 (0%)
Strand=Plus/Plus
Query 48134 GCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCA 48193
|||||||| | |||||||| ||||| || ||| | | | ||||||||| |||||
Sbjct 3358456 GCAAAGTCACAATGCAAGCCCTCGTCGCGTGAGATCAACTCATTGGAGAAGGTCAGACCG 3358515
Query 48194 GGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATG 48253
||||| | || | | || ||||| || || | || || |||| ||||||||
Sbjct 3358516 GGCATCAGACCACGTTTCTTCAGCCAAAAGATCGAGGCAAAGCTGCCACTAAAGAAGATT 3358575
Query 48254 CCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATC 48313
|||||||| || |||||||| ||| ||||| || || || ||| ||| |||
Sbjct 3358576 CCCTCCACGGCAGCGAACGCAATGATTCTCTCGCCAAAGTTCGCCGCCTTCGATGAAATC 3358635
Query 48314 CAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAG 48373
|| || |||||||| || ||||| ||||| ||||| || || ||||| |||
Sbjct 3358636 CAAGAGAGCGCCCAATCGGCCTTTCGCTTGACAGCGGGCATTGTTTCAATGGCATTGAAC 3358695
Query 48374 AGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTCA 48433
|| | | | || || ||| || ||| ||| || |||| |||||||||
Sbjct 3358696 AGATAATCCCGTTCCTGTGGATCCCTAATATATGTATCGATCAGCACGCTGTACATCTCC 3358755
Query 48434 GAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGC 48493
|||||||||||||| || ||||| || || || ||||| | || || | |||
Sbjct 3358756 GAGTGCACATTCTCCATGGCGATTTGAAAGCCATAGAAACAACGAGCTTCGGTTATTTGC 3358815
Query 48494 ACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAG 48553
|| || | ||| | ||| | ||||||||||| || || ||||| || || ||||||
Sbjct 3358816 ACCTCCTGGCTGAAGCGCTCGACAAGATTCTCATTAACAATGCCATCGGAGGCGGCAAAG 3358875
Query 48554 AAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATTCCAGCCCTGT 48613
||||| || ||||| | || || |||||||| | || | | |||| |
Sbjct 3358876 AAGGCGAGCACATGGGAGATAAAGTGACGCTCGTTATCAGTTAAACGTGCCCAGTCGGTC 3358935
Query 48614 ACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGC 48657
| |||||| || ||||| ||||||||||||||||| || ||
Sbjct 3358936 AAGTCTTTAGAGAGATCCACCTCTTCCACAGTCCAGAATGAGGC 3358979
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931495794859520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |