Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20arizonae_20[refseq_20GCF_5F001654025.1_202016-05-09]
3,178 sequences; 141,386,800 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq4 102 2e-16
>seq4
Length=23952536
Score = 102 bits (112), Expect = 2e-16
Identities = 347/528 (66%), Gaps = 12/528 (2%)
Strand=Plus/Minus
Query 25506 CTCAAACTGGACCGCCGAAGAGATTGATCTGGCCAAGGACATGGACGGCTGGT-ACGCTC 25564
|||| |||||| | |||||| | ||||| | || ||| || || |||| ||| |
Sbjct 3358977 CTCATTCTGGACTGTGGAAGAGGTGGATCTCTCTAAAGACTTGACCGACTGGGCACGTT- 3358919
Query 25565 TATCCAAAGACGAGCAGCATTTTCTCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATG 25624
|| | | |||||| || ||| || | ||| | || |||||||| ||||| ||||
Sbjct 3358918 TAACTGATAACGAGCGTCACTTTATCTCCCATGTGCTCGCCTTCTTTGCCGCCTCCGATG 3358859
Query 25625 GTATAGTGAACGAGAATCTGTGCGAGAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCA 25684
| || || || |||||||| |||| | |||| | ||| ||||| || ||
Sbjct 3358858 GCATTGTTAATGAGAATCTTGTCGAGCGCTTCAGCCAGGAGGTGCAAATAACCGAAGCTC 3358799
Query 25685 AGTGTTTCTACGGTTTCCAGATGGCCATCGAAAATGTGCACTCTGAGGTGTATGCCAAGC 25744
|||||||| || || || || ||||| || ||||||||||| ||| |||| | ||
Sbjct 3358798 GTTGTTTCTATGGCTTTCAAATCGCCATGGAGAATGTGCACTCGGAGATGTACAGCGTGC 3358739
Query 25745 TTCT-GATGACGTACATTACAGACGTCGCC--GAGAGAGATCGGCTGTTTGGTGCCATCG 25801
| | ||| || || |||| || || | || | ||| ||||| |||||| |
Sbjct 3358738 TGATCGAT-ACATATATTAGGGA--TCCACAGGAACGGGATTATCTGTTCAATGCCATTG 3358682
Query 25802 AGCACATACCCAGCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGA 25861
| || ||| ||||| | ||||| ||||| | ||||| || | |
Sbjct 3358681 AAACAATGCCCGCTGTCAAGCGAAAGGCCGATTGGGCGCTCTCTTGGAT-TTCATCGAAG 3358623
Query 25862 GC-GCTACGTTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGC 25920
|| || | ||||||||| | | | || || ||||| |||||||| ||||| || ||
Sbjct 3358622 GCGGCGAACTTTGGCGAGAGAATCATTGCGTTCGCTGCCGTGGAGGGAATCTTCTTTAGT 3358563
Query 25921 GGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAGAAGGGGAC-CATGCCCGGGCTGTACTT 25979
|| ||||| | ||||| ||||| ||| | | | || | |||||||| ||| |||
Sbjct 3358562 GGCAGCTTTGCCTCGATCTTTTGGCTGAAG-AAACGTGGTCTGATGCCCGGTCTGACCTT 3358504
Query 25980 TTCCAACGAGCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGC 26027
||||| ||| | ||| | |||||||| | || | || |||||
Sbjct 3358503 CTCCAATGAGTTGATCTCACGCGACGAGGGCTTGCATTGTGACTTTGC 3358456
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928807901640320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |