Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20arizonae_20[refseq_20GCF_5F001654025.1_202016-05-09]
3,178 sequences; 141,386,800 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq2 150 9e-32
>seq2
Length=27840087
Score = 150 bits (166), Expect = 9e-32
Identities = 317/473 (67%), Gaps = 0/473 (0%)
Strand=Plus/Minus
Query 25887 TATTTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTG 25946
||| |||||| | ||| ||| || |||| ||||| | |||||| | ||| |
Sbjct 27784113 TATGTGGACACATTAATGACCAGTCTTCATTAGCTTCAACACGTTTCATAAAAAGATCAG 27784054
Query 25947 GAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTT 26006
| ||||||| |||| |||| | ||| | || | || || ||||| ||| ||||
Sbjct 27784053 GTATCCACAATGCAAAAAAAAGATCGCGTGCACGATGCTCCTCCTTTCCAGTATTTTTTT 27783994
Query 26007 TTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTAC 26066
| || || || || || || | |||||||||||| || || ||||| |||||||| |
Sbjct 27783993 TAAGGTCCAAAAATTCGAAGACATCTGAGTGCCAAGGCTCCAAATATATAGCAAATGCTC 27783934
Query 26067 CTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACA 26126
| |||||| || || || ||||| || || | || | ||| || ||| | ||||
Sbjct 27783933 CAGGTCTTTTACCACCGCCCTGATCAACATAACGCGCGACATTATTAAATACTCTTAACA 27783874
Query 26127 TTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAA 26186
|||| ||||||||| ||||| ||||| || | | ||| || ||| | | || ||
Sbjct 27783873 TTGGTACTAATCCATTTGAAGTGCCGTTCGTTCCACAAATTGAGGTGCCTTTAGCTCGAA 27783814
Query 26187 TATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATCTGAAA 26246
|| |||| ||| || || || ||||| ||| | ||||| || ||| || | | ||
Sbjct 27783813 TACAGTGAACATTAAGTCCAATGCCACCTGCCGACTTTGATATCATTGCGCATTGTTCAA 27783754
Query 26247 CTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGATA 26306
||| | ||||| |||| || |||| || ||| | |||||| ||||| |
Sbjct 27783753 CTGATTTAAAAATCCCTTCAATTGAATCAGACACTATAGTTAAAAGAAAACATGAAGACA 27783694
Query 26307 ATTGCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATGAGTATAA 26359
|||| | | || |||| ||| | ||| | || |||| ||||||||| ||
Sbjct 27783693 ATTGTGGACGATTTGTGGCTGCAGCAAAAAGAGTTGGTGATGCATGAGTAAAA 27783641
Score = 84.2 bits (92), Expect = 1e-11
Identities = 96/129 (74%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 25015 AAATTCTCCAGACAAAACTCTTCTTATTGATAAGTTTGAAGTGAATGGTTCAAAACATTC 25074
|||||| ||||||||||||| |||| | | | ||||||||| | || || || | ||
Sbjct 27784952 AAATTCGCCAGACAAAACTCGTCTTGTGTAAATGTTTGAAGTATAAGGCTCGAACGACTC 27784893
Query 25075 ATTATTTCCTAAGATTTGAGAAGTAGATGCTGTTGGCATTAATGCTATTAATAGCGAATT 25134
|||||| || || ||||| | ||| |||||||| ||||| || || | || |||||
Sbjct 27784892 ATTATTGCCCAATATTTGCGCAGTGGATGCTGTAGGCATGGGAGCGATGAGTAAAGAATT 27784833
Query 25135 TCTCAAACC 25143
||| | |||
Sbjct 27784832 TCTGACACC 27784824
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 253030199286350
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |