Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20arizonae_20[refseq_20GCF_5F001654025.1_202016-05-09] 3,178 sequences; 141,386,800 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq6 149 5e-31 seq2 86.0 5e-12 >seq6 Length=26536676 Score = 149 bits (164), Expect = 5e-31 Identities = 157/207 (76%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 34437 ATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGG 34496 ||||| |||||||| ||||||| ||| || || |||||||| || || || | || || Sbjct 9511036 ATCGAATTGCGTTTGGGCGCCCAACTCACAGCCAAAGTACTTGGTTGGATAGGTAGCTGG 9511095 Query 34497 ACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCC 34556 | ||| | ||| | || | |||| ||||||||||| ||| || |||||||||||||| Sbjct 9511096 TCTTCCGATCGCTCTTGCCACCTCGGCCATGTTGACGAGGACCGTTTTGATGCCGTTGCC 9511155 Query 34557 CTTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCCAC 34616 || ||||| || ||||| || ||| |||||||||||||| ||||| |||| || Sbjct 9511156 TTTACCTTCCACTTTGGCCTGGAGGCGTGGCATTTTGTAGCGATAGAAGATATCCGTAAC 9511215 Query 34617 ATTGCGGTTAACGTTCACAGTCCCCAT 34643 | |||| || ||||| || ||| |||| Sbjct 9511216 ACTGCGATTCACGTTGACGGTCGCCAT 9511242 >seq2 Length=27840087 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 110270 AAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCT 110329 ||||||||||| || || |||||| | |||||||| |||||||| | || ||||| Sbjct 185368 AAAATGCAAATCTTCGTTAAAACTCTCACCGGCAAGACCATTACTTTGGAGGTCGAGCCC 185427 Query 110330 GACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGAT 110389 || || ||| | || || ||||| |||||||| || | || ||| Sbjct 185428 TCTGACACCATCGAGAATGTCAAGGCCAAGATCCAAGACAAAGAGGGAATCCCACCAGAT 185487 Query 110390 CAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTAC 110449 || || | || || | || || || ||||||||||||| | || || | || ||| Sbjct 185488 CAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGACGCACTCTGTCCGACTAC 185547 Query 110450 AACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 |||||||| || || || || |||||| ||||| | | ||||| || || Sbjct 185548 AACATTCAGAAGGAGTCCACTTTGCACTTGGTGCTCCGTCTGCGTGGTGG 185597 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412825609870754