Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20arizonae_20[refseq_20GCF_5F001654025.1_202016-05-09]
3,178 sequences; 141,386,800 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq6 149 5e-31
seq2 86.0 5e-12
>seq6
Length=26536676
Score = 149 bits (164), Expect = 5e-31
Identities = 157/207 (76%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 34437 ATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGG 34496
||||| |||||||| ||||||| ||| || || |||||||| || || || | || ||
Sbjct 9511036 ATCGAATTGCGTTTGGGCGCCCAACTCACAGCCAAAGTACTTGGTTGGATAGGTAGCTGG 9511095
Query 34497 ACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCC 34556
| ||| | ||| | || | |||| ||||||||||| ||| || ||||||||||||||
Sbjct 9511096 TCTTCCGATCGCTCTTGCCACCTCGGCCATGTTGACGAGGACCGTTTTGATGCCGTTGCC 9511155
Query 34557 CTTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCCAC 34616
|| ||||| || ||||| || ||| |||||||||||||| ||||| |||| ||
Sbjct 9511156 TTTACCTTCCACTTTGGCCTGGAGGCGTGGCATTTTGTAGCGATAGAAGATATCCGTAAC 9511215
Query 34617 ATTGCGGTTAACGTTCACAGTCCCCAT 34643
| |||| || ||||| || ||| ||||
Sbjct 9511216 ACTGCGATTCACGTTGACGGTCGCCAT 9511242
>seq2
Length=27840087
Score = 86.0 bits (94), Expect = 5e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 110270 AAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCT 110329
||||||||||| || || |||||| | |||||||| |||||||| | || |||||
Sbjct 185368 AAAATGCAAATCTTCGTTAAAACTCTCACCGGCAAGACCATTACTTTGGAGGTCGAGCCC 185427
Query 110330 GACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGAT 110389
|| || ||| | || || ||||| |||||||| || | || |||
Sbjct 185428 TCTGACACCATCGAGAATGTCAAGGCCAAGATCCAAGACAAAGAGGGAATCCCACCAGAT 185487
Query 110390 CAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTAC 110449
|| || | || || | || || || ||||||||||||| | || || | || |||
Sbjct 185488 CAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGACGCACTCTGTCCGACTAC 185547
Query 110450 AACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499
|||||||| || || || || |||||| ||||| | | ||||| || ||
Sbjct 185548 AACATTCAGAAGGAGTCCACTTTGCACTTGGTGCTCCGTCTGCGTGGTGG 185597
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412825609870754
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |