Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20arizonae_20[refseq_20GCF_5F001654025.1_202016-05-09]
3,178 sequences; 141,386,800 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq6 131 2e-25
seq2 125 7e-24
>seq6
Length=26536676
Score = 131 bits (144), Expect = 2e-25
Identities = 150/199 (75%), Gaps = 2/199 (1%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|| ||||| ||||| || ||||| ||| || ||| | | | ||||| |||||||||||
Sbjct 9462024 GTAGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCA-TCCTCCAGCTGCTTGCC 9462082
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| | || || |||||||| || || || || || |||||||| |||||| |||
Sbjct 9462083 AGCGAAGATCAGACGCTGCTGATCTGGGGGAATACCCTCCTTGTCTTGGATCTTGGCCTT 9462142
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
| | ||||| ||||| | |||||| || || | ||||| ||||||||| |||| |||
Sbjct 9462143 AACATTCTCAATGGTGTCCGAGGGCTCGACCTCCAAGGTGATGGTTTTGCCAGTCAAAGT 9462202
Query 133643 TTTTACGAAAATCTGCATG 133661
|| ||||| |||||||||
Sbjct 9462203 CTTGACGAAGATCTGCATG 9462221
Score = 116 bits (128), Expect = 4e-21
Identities = 150/205 (73%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515
||| | ||| ||||| ||||| || || || ||| || ||| | | | ||||| ||||
Sbjct 9462245 ATGAAGGGTCGACTCCTTCTGGATGTTRTAGTCGGACAGAGTGCGTCCA-TCCTCCAGCT 9462303
Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575
||||||| ||| | || || |||||||| || || || || || |||||||| |||||
Sbjct 9462304 GCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGGGGAATACCCTCCTTGTCTTGGATCT 9462363
Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635
| ||| | | |||| ||||| | |||||| || || | |||| ||| ||||| |
Sbjct 9462364 TGGCCTTAACATTTTCAATGGTGTCCGAGGGCTCAACCTCCAAAGTGATGGTCTTGCCAG 9462423
Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660
||| ||| || ||||| ||||||||
Sbjct 9462424 TCAAAGTCTTGACGAAGATCTGCAT 9462448
>seq2
Length=27840087
Score = 125 bits (138), Expect = 7e-24
Identities = 148/198 (75%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|||||||| ||||| || ||||| ||| || ||| | | | ||||| |||||||||||
Sbjct 185567 GTGGACTCCTTCTGAATGTTGTAGTCGGACAGAGTGCGTCCA-TCCTCCAGCTGCTTGCC 185509
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| | || || |||||||| || || ||||| || || ||||| |||||| |||
Sbjct 185508 GGCGAAGATCAGACGCTGCTGATCTGGTGGGATTCCCTCTTTGTCTTGGATCTTGGCCTT 185449
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
|| | ||| | ||||| | |||||| || || | || | ||| |||||||| |||||
Sbjct 185448 GACATTCTCGATGGTGTCAGAGGGCTCGACCTCCAAAGTAATGGTCTTGCCGGTGAGAGT 185389
Query 133643 TTTTACGAAAATCTGCAT 133660
||| ||||| || |||||
Sbjct 185388 TTTAACGAAGATTTGCAT 185371
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483401596108720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |