Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20arizonae_20[refseq_20GCF_5F001654025.1_202016-05-09]
3,178 sequences; 141,386,800 total letters
Query= NC_026268.1
Length=139132
Score E
Sequences producing significant alignments: (Bits) Value
seq2 122 8e-23
>seq2
Length=27840087
Score = 122 bits (134), Expect = 8e-23
Identities = 488/751 (65%), Gaps = 18/751 (2%)
Strand=Plus/Minus
Query 136975 TGCTGATTTACTACTTGATATTCGCCCGATAGCACTCTGCGTACGTACAGATTACTAGTG 137034
|| || || ||||| ||| ||||||| || | |||| | | ||| | || |||
Sbjct 27784969 TGGTGGTTCACTACCTGAAATTCGCCAGACAAAACTCGTCTTGTGTAAATGTTTGAAGTA 27784910
Query 137035 AACGGCTCGAACGATTCGTTGTTACCCAAAATCTGTGCAGTCGTCGCTGTCGGCATGTAA 137094
| ||||||||||| || || || ||||| || || ||||| | ||||| |||||| |
Sbjct 27784909 TAAGGCTCGAACGACTCATTATTGCCCAATATTTGCGCAGTGGATGCTGTAGGCATGGGA 27784850
Query 137095 GCGATCAACAATGAATTCCGTAAACCGTGTACGGCCAATTGTTGCTTGAGCTCTTTCCAG 137154
||||| | || ||||| | | ||||||| || | || || || | |||||
Sbjct 27784849 GCGATGAGTAAAGAATTTCTGACACCGTGTTGCGCTATAGATTTTTTAAGAGCATTCCAA 27784790
Query 137155 TTCCACAGAT-TGTTCGATTGGGTTATATTCCACAAATCAAACTGCAAAAGTCCGCGACT 137213
| ||| |||| ||| | | | | | ||||||| |||| ||||||||| ||| ||
Sbjct 27784789 TCCCAAAGATCTGT----TGGTGATTTTTTCCACATATCATACTGCAAAATTCCTTTGCT 27784734
Query 137214 TGCAGGACTTTCTGCATAAGAATCATATGTTCCGTGCAGTTTCGCCAGTTCAATACTCTG 137273
| | ||||| | |||||| ||||||| ||| | | || | |||| ||
Sbjct 27784733 TACTGGACTGCCAACATAAGTCTCATATGGTCCATCTCTCTGAGCTAATTCACAGCTGGC 27784674
Query 137274 GACTAGTGCGCCATAGTAAATAGTTTCGGAGATTTTTCTATTCAATTCTCTAGCTTCTTG 137333
| | || |||||||| ||||||||| | || | ||| ||| ||||| |
Sbjct 27784673 TTCCAAAGCTCCATAGTATATAGTTTCGAAAATCTGCTGATTTAATAAAAATGCTTCACG 27784614
Query 137334 GCTGTCGTAGGGCATATC-CAATATAGCGAAAGCATCTGCAAGTCCTTGAATACCGATAC 137392
|| ||||| || ||| | || || || || || |||| ||||| | || ||||
Sbjct 27784613 ACTTTCGTA-GGAATACCGCATTAATATTAATGCGTCCGCAAACCCTTGGACTCCAATAC 27784555
Query 137393 CGATAGGTCTGTGTTTAAAATTTGATATTTGAGC-GCTAACAAGCGGATAAAAGTTTGCG 137451
| ||||| | ||| ||||||||| ||| ||| || ||| || || | |||
Sbjct 27784554 CAATAGGACGGTGACGTAAATTTGATTTTTTAGCTTCTGGCAA-AGGGTAGTAATTTATA 27784496
Query 137452 TCTATAATTCTATTGAGATTGTTAGTAACGACTCTGGACACTTTGTAGAGCAATTCGAAA 137511
|| || ||| |||| | || || ||||||| | | | |||| | ||| || ||
Sbjct 27784495 TCAATTATTTTATTTAAGTTTTTCGTAACGATTTTAGTTACTTCTTTAAGCTTTTTAAAG 27784436
Query 137512 TCGAAGCTTTTAGACTGTTTGTTAGCAAAATTATTGACGGCAATAGAGGCTAAGTTGCAT 137571
|| | ||| ||| || | |||| |||| | || ||||| || || || ||
Sbjct 27784435 TCATAAGATTTCTCCTG--CGTCA-CAAACATATTAAGTGCGATAGACGCCAAATTACAC 27784379
Query 137572 ACGGCCGTTTC-TGTATTGTCGCTGTATTGTACAATTTCGGCGCAAAGATTGCTGTTTCG 137630
|| || |||| | | || || |||| || ||||| | ||| ||||| ||| |
Sbjct 27784378 ACAGCTATTTCATCTGGTGCCG-AATATTCAACTATTTCTGTGCACAGATTACTGCATTT 27784320
Query 137631 GATCACTCCCAAATTCTTTTGATTG-TTTTTCTCGTTGACGTGA-TCTTTATATATCATA 137688
|| ||| | ||| | ||| ||| ||||||| ||| || || || ||| ||| |||
Sbjct 27784319 TATAGTTCCAACATTTTGTTGGTTGCTTTTTCT-GTT-ACAAGAGTCCTTAAATAACATG 27784262
Query 137689 TACGGAGTTCCGGTTTCGACTTGAGTCTCAA 137719
|| ||||| || || || ||||||| ||||
Sbjct 27784261 TAAGGAGTACCAGTCTCTACTTGAGATTCAA 27784231
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445076718624960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |