Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20arizonae_20[refseq_20GCF_5F001654025.1_202016-05-09]
3,178 sequences; 141,386,800 total letters
Query= NC_026421.1
Length=182380
Score E
Sequences producing significant alignments: (Bits) Value
seq2 134 2e-26
>seq2
Length=27840087
Score = 134 bits (148), Expect = 2e-26
Identities = 390/594 (66%), Gaps = 10/594 (2%)
Strand=Plus/Plus
Query 146919 CAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCC 146978
|||||| | ||| || ||| |||||||| || || ||||| || || ||||| || ||
Sbjct 14040414 CAGGGGATTCACATGATTGTTATAGACGTGAGCATCGCCCAGTGTATGGACAAAATCGCC 14040473
Query 146979 CGGCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTT 147038
|| || | ||| ||||| ||||| | ||||||||| | || | || ||| |||||
Sbjct 14040474 GGGTTTTAAGCCCGTCACATGGGCGATCATGTAGGTCAACAAGGCATACGAGGCGATGTT 14040533
Query 147039 GAAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCC 147098
||| || || ||||| |||||||| | | ||| ||||| ||||| || | || ||
Sbjct 14040534 GAAAGGCACTCCCAGACCCATGTCGGCGCTGCGCTGATACAGTTGGCAGGACAATTCACC 14040593
Query 147099 ----GTCGGCCA--CGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGG 147152
| | || | | || ||||| |||| |||||||||||||| |||||| |||
Sbjct 14040594 ACGCGACTGCGATACATAGAACTGCGCCAGGCAGTGGCACGGCGGCAACGCCATTTGGGG 14040653
Query 147153 CAGGTCCGCGGGGTTCCAGGCCGAGACCACCAGCCGCCTGCTCTCGGGGTTCCTCTTAAT 147212
| |||| || |||||||| || | | | || | | | || || | ||
Sbjct 14040654 TATGTCCAAAGGATTCCAGGCGGACATTATGATGCGACGATCCGCCGGATTGTTGCGTAT 14040713
Query 147213 CTCTTCGATAACCCACCTCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTC-CCGCAGT 147271
||||| ||| ||||||| || | |||||||| |||| | ||| ||| |
Sbjct 14040714 AGTATCGATGACCTGTTTCAGCTGATCAATACCCTGGCCGGTGTAG-TCGTCGGTGCATT 14040772
Query 147272 CCACGTACCTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGG 147331
| || | || |||||||| | |||||||||||| || || || ||||| || ||
Sbjct 14040773 TACCATATTTTGCGCCAAAGTGACGCCACTGGAAGCCATATACCGGACCCAGATCACCCA 14040832
Query 147332 GCTTTCTGTGCGAGAAGCCCGCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGA 147391
|| | | || | ||| | |||||||||| ||| | | | ||||| |
Sbjct 14040833 CCTCGCGATCCGTGTGGCCACATTTGTCGAGAAACTCGCGGGTGCTATTACCATCCCATA 14040892
Query 147392 TGCCCACTCCCTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCG-GATGAACCAGAGC 147450
|| || ||| | || ||| | || || |||| | |||||||||| |
Sbjct 14040893 TGTGTACATTCTTCTCCTGCAGGATCTTTGCATCTGT-CTGCCCAGCAATGAACCAGATC 14040951
Query 147451 AGCTCCTCCAAAACCCCCCTCCAAAAGACCCTCTTGGTGGTCAGCAGGGGGAAC 147504
|||||||| || |||| | ||||| | |||||||||||||| |||||||
Sbjct 14040952 AGCTCCTCGGCCACGCCCCGAAAGAAGACGCGCTTGGTGGTCAGCAAGGGGAAC 14041005
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583464820939200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |