Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20arizonae_20[refseq_20GCF_5F001654025.1_202016-05-09]
3,178 sequences; 141,386,800 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq4 122 1e-21
>seq4
Length=23952536
Score = 122 bits (134), Expect = 1e-21
Identities = 321/482 (67%), Gaps = 6/482 (1%)
Strand=Plus/Minus
Query 1455796 AGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCTCGGCGCCGACACGGTCCACT 1455855
|||| |||||||| || ||||| | || ||||| || ||| ||| | | |||
Sbjct 3358987 AGGCTGAGGCCTCATTCTGGACTGTGGAAGAGGTGGATCTCTCTAAAGACTTGACCGACT 3358928
Query 1455856 GGGTGTCGCTGAGC-GACGACGAGCGCCATTTCATCAAGCACGTCCTCGCCTTTTTTCGC 1455914
||| || | | | || ||||||| || || ||| || || |||||||| ||| ||
Sbjct 3358927 GGGCA-CGTTTAACTGATAACGAGCGTCACTTTATCTCCCATGTGCTCGCCTTCTTT-GC 3358870
Query 1455915 CGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGCTTTATGAAAGAGGTCCAATT 1455974
|||| ||||||||| || ||||| || | || ||||| | | ||||| ||| |
Sbjct 3358869 CGCCTCCGATGGCATTGTTAATGAGAATCTTGTCGAGCGCTTCAGCCAGGAGGTGCAAAT 3358810
Query 1455975 GCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAAAC 1456034
| || || |||| || || || || || |||||||| || || | ||||| || |
Sbjct 3358809 AACCGAAGCTCGTTGTTTCTATGGCTTTCAAATCGCCATGGAGAATGTGCACTCGGAGAT 3358750
Query 1456035 CTACTCGCTCCTGATCGACACCTACGTCAAGGACCCGGTCGAGAAGGACCACCTCTTTCG 1456094
||| | |||||||| || || | | ||| || || ||| | || ||
Sbjct 3358749 GTACAGCGTGCTGATCGATACATATATTAGGGATCCACAGGAACGGGATTATCTGTTCAA 3358690
Query 1456095 CGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGACTGGGCGATGAAGTGGATCAA 1456154
||||| || || |||| | || | | ||||||||| |||||| | |||||
Sbjct 3358689 TGCCATTGAAACAATGCCCGCTGTCAAGCGAAAGGCCGATTGGGCGCTCTCTTGGATTT- 3358631
Query 1456155 CAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCGTCGGCTTTGCCGC-GTCGAGGGCATC 1456213
|| || ||| ||| |||||| |||| | || | | || || || || ||||| |||
Sbjct 3358630 CATCGAAGGCGGCGA-ACTTTGGCGAGAGAATCATTGCGTTCGCTGCCGTGGAGGGAATC 3358572
Query 1456214 TTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGT 1456273
|| || ||||| || | | ||||||||||| ||||| || || || |||||||||
Sbjct 3358571 TTCTTTAGTGGCAGCTTTGCCTCGATCTTTTGGCTGAAGAAACGTGGTCTGATGCCCGGT 3358512
Query 1456274 CT 1456275
||
Sbjct 3358511 CT 3358510
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177504676058836
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |