Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20arizonae_20[refseq_20GCF_5F001654025.1_202016-05-09]
3,178 sequences; 141,386,800 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq2 136 4e-27
seq3 109 6e-19
seq6 91.5 1e-13
>seq2
Length=27840087
Score = 136 bits (150), Expect = 4e-27
Identities = 164/223 (74%), Gaps = 0/223 (0%)
Strand=Plus/Minus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
|| || | ||| | ||| | ||||| ||||| ||||||||||||||| | ||| |
Sbjct 185588 AGACGGAGCACCAAGTGCAAAGTGGACTCCTTCTGAATGTTGTAGTCGGACAGAGTGCGT 185529
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
|| || ||||| ||||| || || |||| |||||||||||| || || || || |||
Sbjct 185528 CCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGTGGGATTCCCTCT 185469
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675
|| ||||| || || ||||| || | ||||| || | || || || | ||||
Sbjct 185468 TTGTCTTGGATCTTGGCCTTGACATTCTCGATGGTGTCAGAGGGCTCGACCTCCAAAGTA 185409
Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTGT 134718
||||| || ||||| | |||||||||||| |||||||||||||
Sbjct 185408 ATGGTCTTGCCGGTGAGAGTTTTAACGAAGATTTGCATTTTGT 185366
Score = 122 bits (134), Expect = 9e-23
Identities = 160/222 (72%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
|| || | ||| | ||| | || || || ||||| |||||||||||| || ||| ||
Sbjct 14207455 AGGCGGAGCACCAAGTGCAAGGTTGACTCTTTTTGGATGTTGTAGTCGGAAAGAGTGCGA 14207514
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
|| || | || ||||| ||||| || | |||||||||||| || || || ||||||
Sbjct 14207515 CCATCTTCCAATTGCTTGCCAGCAAAGATTAGACGCTGCTGATCTGGAGGAATTCCTTCT 14207574
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675
|| || || || || |||||| || | || || |||| ||| || || |||||
Sbjct 14207575 TTGTCCTGGATCTTGGCTTTGACATTCTCGATGGTATCCGACGGTTCGACCTCAAGAGTG 14207634
Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717
||||| ||||| |||| |||||||| || || |||||| ||
Sbjct 14207635 ATGGTCTTACCCGTTAGGGTTTTAACAAAGATCTGCATTGTG 14207676
Score = 96.9 bits (106), Expect = 4e-15
Identities = 698/1102 (63%), Gaps = 37/1102 (3%)
Strand=Plus/Plus
Query 8233 GCCATTATCGAATGTCAAAACGAAACCGGTATGCCGTACATGCTGTACAAAGACGCTTGC 8292
||||| || |||| |||| || || |||| || |||||| | | || ||| ||||
Sbjct 27784224 GCCATCATTGAATCTCAAGTAGAGACTGGTACTCCTTACATGTTATTTAAGGACTCTTGT 27784283
Query 8293 AACGCCAAAAGCAATCAAAGCAACGTGGGCACCATTTGTTGCAGCAATCTGTGCGCTGAA 8352
||| |||||||| ||| || || || || || ||||| ||||||||| | |||
Sbjct 27784284 AACAGAAAAAGCAACCAACAAAATGTTGGAACTATAAAATGCAGTAATCTGTGCACAGAA 27784343
Query 8353 ATTGTACAGTACAGCGCGCCCGACGAAGTGGCCGTTTGCAATCTAGCGTCGGTGTGTTTA 8412
|| || | || || || || ||| | || || || ||| | ||||| | |
Sbjct 27784344 ATAGTTGAATATTCGGCACCAGATGAAATAGCTGTGTGTAATTTGGCGTCTATCGCACTT 27784403
Query 8413 AACGCGTTCGTTGATCGACGCTCAAACACTTACGACTTTGAACAATTGAAAAACGCCGTG 8472
|| ||| || || || | ||| |||| |||||| || | | ||| | |
Sbjct 27784404 AATATGTTTGT-GA-CGCAGGAGAAAT-CTTATGACTTTAAAAAGCTTAAAGAAGTAACT 27784460
Query 8473 CAAGTGACGGTACGCAAT--TTAGATCGCATCATTGATGTCAATTTTTATCCCTTGGAAG 8530
|| | || |||| || ||| || || |||||| | |||| || || ||| ||
Sbjct 27784461 AAAAT--CGTTACGAAAAACTTAAATAAAATAATTGATATAAATTACTACCCTTTGCCAG 27784518
Query 8531 AAGCGCGCGTATCGAACATGCGCCACAGACCCGTTGGCGTGGGCGTGCAAGGTCTGGCCG 8590
|||| ||| || | || ||| | || |||| | || || ||||| | || |
Sbjct 27784519 AAGCTAAAAAATCAAATTTACGTCACCGTCCTATTGGTATTGGAGTCCAAGGGTTTGCGG 27784578
Query 8591 ACGCGTTTGCCATGTTGCGCCTCCCCTACGAAAGCCAAGAAGCGCGCATGCTCAA-CATA 8649
|||| || | |||| |||||||||| | ||||| | | || ||
Sbjct 27784579 ACGCATTAATATTAATGCGGTATTCCTACGAAAGTCGTGAAGCATTTTTATTAAATCAGC 27784638
Query 8650 AAAATAGCGGAAACGGTGTATTACGGCGCATTAGAAGCCAGCTGTCAACTTGCCC-GAGA 8708
| | | || |||| | || || || || || |||||||||||| || | || | ||||
Sbjct 27784639 AGATTTTCG-AAACTATATACTATGGAGCTTTGGAAGCCAGCTGTGAATTAGCTCAGAGA 27784697
Query 8709 ATTGGGCACGTACGAATCGTACGCGGGCAGCCCTGCCAGCCGCGGAATATTGCAATACGA 8768
||| | | || || | || | ||||| || | ||| ||||| ||||| || ||
Sbjct 27784698 GATGGAC-CATATGAGACTTATGTTGGCAGTCCAGTAAGCAAAGGAATTTTGCAGTATGA 27784756
Query 8769 CATGTGGAATG--TCACGCCCACCTCTTTGTGGAATTGGAGCGATTTGAAACGCAAA--- 8823
|||||||| |||| || |||||| | |||||| | | | ||| |||
Sbjct 27784757 TATGTGGAAAAAATCACCAACAGATCTTTGGG--ATTGGAATGCTCTTAAA---AAATCT 27784811
Query 8824 ATTGCTCAATTCGGTTTGCGCAATTCGCTGTTGGTGGCTTACATGCCCACCGCCACGACT 8883
|| || ||| |||| | | ||||| | | | ||| |||||| || || | |||
Sbjct 27784812 ATAGCGCAACACGGTGTCAGAAATTCTTTACTCATCGCTCCCATGCCTACAGCATCCACT 27784871
Query 8884 GCTCAAATAATGGGAAACAACGAATCCTTTGAGCCGTTCACCAACAACGTGTACGTGAGA 8943
|| |||||| |||| || || || || || ||||| | || ||| | ||| |||
Sbjct 27784872 GCGCAAATATTGGGCAATAATGAGTCGTTCGAGCCTTATACTTCAAACATTTACACAAGA 27784931
Query 8944 CGAGTGTTGGCCGGCGATTTTTTAATGCTGAATCGTCATTTGATGCGCGACTTGATCGAA 9003
||||| ||| | ||||| ||| | |||| | || || | || || || | |||
Sbjct 27784932 CGAGTTTTGTCTGGCGAATTTCAGGTAGTGAACCACCACTTACTACGTGATTTAACTGAA 27784991
Query 9004 GCGGGCGTTTACGACGACAAAATGCGCGATGCCATCGTGG-AAGCCAACGGCAGCGTTCA 9062
| | | || ||| | ||| || || | ||| | || | ||
Sbjct 27784992 CTTGATTTGTGGGATGACGAGATGAAAAATCAAATAATATCAAGTCGT-GGTTCAATACA 27785050
Query 9063 GAACATTGACGCGGTGCCTCAACACATTAAAGAGCTGTATAAAACCGTTTGGGAAATGA- 9121
|| ||||| | | ||| || | ||| || |||||||||| || ||||||||
Sbjct 27785051 AAATATTGAATCTATTCCTAAAGAAATTCGTGATTTGTATAAAACTGTGTGGGAAATTTC 27785110
Query 9122 AG-CAAAGCACGCTGATCGGCATGGCTGCGGATAGAGGCGCTTTTATTGATCAGAGTCAA 9180
|| |||| || || || ||||| || |||||||| || ||||||||||| |||||
Sbjct 27785111 AGTCAAATCAA-CT-ATAAAAATGGCGGCTGATAGAGGAGCGTTTATTGATCAAAGTCAG 27785168
Query 9181 TCTTTTAACGTGTTC--GTAGCCGCACCAACTTACG---CTTTGATGTCCAGCATTCATT 9235
||||| || | ||| ||||| | ||| | ||| | || | ||| || ||||
Sbjct 27785169 TCTTTCAA--TATTCATGTAGCTGAACCCAATTATGGAAAATTAACGTC---AATCCATT 27785223
Query 9236 ATTTAACTTGGAAAATGGGTTTAAAAACAGGCATGTACTATTTGCGCACAAAACCCGCCG 9295
|| | |||||| |||| | || || |||||||| ||| | ||||||||||| || |
Sbjct 27785224 TTTATTCATGGAAAGCGGGTCTTAAGACCGGCATGTATTATCTTCGCACAAAACCAGCGG 27785283
Query 9296 CTGAACCTATCAAATTTACAGT 9317
|| | |||| |||| || ||
Sbjct 27785284 CTAATGCTATACAATTCACTGT 27785305
>seq3
Length=22052390
Score = 109 bits (120), Expect = 6e-19
Identities = 154/214 (72%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTGAGAGTCGTC 134563
|| || || || || || ||||| || || |||||||| | ||| |||| | || ||
Sbjct 1975153 ACCAGATGAAGGGTCGACTCCTTCTGGATATTGTAGTCAGACAA-GGTGCGGCCATCTTC 1975095
Query 134564 GAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTG 134623
|| || ||||| || || |||| |||||||||||| || || || || || || |||||
Sbjct 1975094 CAGTTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGTGGAATTCCCTCCTTATCTTG 1975035
Query 134624 AATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTT 134683
||| || ||||| || | || ||||| | || || || | || ||||| ||
Sbjct 1975034 AATCTTGGCCTTGACGTTCTCAATGGTATCGGAAGGCTCAACCTCCAAGGTGATGGTCTT 1974975
Query 134684 ACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717
|| || |||||||||||||| || |||||||||
Sbjct 1974974 TCCCGTCAAAGTTTTAACGAAGATCTGCATTTTG 1974941
Score = 84.2 bits (92), Expect = 2e-11
Identities = 90/119 (76%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGT 134570
|| || || || ||||||||||||||||| ||| | |||| || || || || ||
Sbjct 1975435 TGAAGGGTAGACTCCTTTTGAATGTTGTAATCGGACAGGGTGCGACCATCTTCCAGTTGC 1975376
Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629
||||| || || |||| |||||||||||| || || || ||||| || || ||||| ||
Sbjct 1975375 TTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGAATACCTTCCTTGTCCTGAATCTT 1975317
>seq6
Length=26536676
Score = 91.5 bits (100), Expect = 1e-13
Identities = 151/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
|| || | ||| | ||| | || || ||||| || |||||||||||| | ||| |
Sbjct 9462003 AGACGGAGCACCAAGTGCAAAGTAGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGT 9462062
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
|| || ||||| ||||| || || |||| |||||||||||| || || || || ||
Sbjct 9462063 CCATCCTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGGGGAATACCCTCC 9462122
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675
|| ||||| || || || || || | ||||| || | || || || | ||
Sbjct 9462123 TTGTCTTGGATCTTGGCCTTAACATTCTCAATGGTGTCCGAGGGCTCGACCTCCAAGGTG 9462182
Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|||||||| || || ||||| || ||||| || |||||
Sbjct 9462183 ATGGTTTTGCCAGTCAAAGTCTTGACGAAGATCTGCAT 9462220
Score = 91.5 bits (100), Expect = 1e-13
Identities = 147/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564
|| || || || || || ||||| || ||||| |||||| | ||| | || ||
Sbjct 9462240 ACCAGATGAAGGGTCGACTCCTTCTGGATGTTRTAGTCGGACAGAGTGCGTCCATCCTCC 9462299
Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624
||||| ||||| || || |||| |||||||||||| || || || || || || |||||
Sbjct 9462300 AGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGGGGAATACCCTCCTTGTCTTGG 9462359
Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684
|| || || || || | ||||| || | || || || | ||| ||||| ||
Sbjct 9462360 ATCTTGGCCTTAACATTTTCAATGGTGTCCGAGGGCTCAACCTCCAAAGTGATGGTCTTG 9462419
Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716
|| || ||||| || ||||| || ||||| ||
Sbjct 9462420 CCAGTCAAAGTCTTGACGAAGATCTGCATATT 9462451
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505378323048560
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