Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20arizonae_20[refseq_20GCF_5F001654025.1_202016-05-09] 3,178 sequences; 141,386,800 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq4 105 2e-17 >seq4 Length=23952536 Score = 105 bits (116), Expect = 2e-17 Identities = 120/160 (75%), Gaps = 1/160 (1%) Strand=Plus/Minus Query 443699 CTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTT 443758 ||| | |||| || | | || || |||| || || ||| | || ||||| |||||||| Sbjct 3358614 CTTTGGCGAGAGAATCATTGCGTTCGCTGCCGTGGAGGGAATCTTCTTTAGTGGCAGCTT 3358555 Query 443759 TAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACG 443818 | ||||| ||||| ||| |||| || ||||| || |||| |||||||||||| || | Sbjct 3358554 T-GCCTCGATCTTTTGGCTGAAGAAACGTGGTCTGATGCCCGGTCTGACCTTCTCCAATG 3358496 Query 443819 AACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGC 443858 | ||||| || |||||||| |||||||| ||||| || Sbjct 3358495 AGTTGATCTCACGCGACGAGGGCTTGCATTGTGACTTTGC 3358456 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588271325936210