Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20arizonae_20[refseq_20GCF_5F001654025.1_202016-05-09]
3,178 sequences; 141,386,800 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq2 91.5 2e-13
>seq2
Length=27840087
Score = 91.5 bits (100), Expect = 2e-13
Identities = 283/427 (66%), Gaps = 12/427 (3%)
Strand=Plus/Plus
Query 178883 AACCCGTGCCGATGCCTTCGGTTCCGTTCACGAGAACCATTGGAAGCGTTGGCATATAGA 178942
|||| ||||||||||| |||| || ||||| | |||||||||| | || |||||
Sbjct 27134875 AACCGGTGCCGATGCCCTCGGCGCCATTCACCAAGACCATTGGAATAATAGGTATATACC 27134934
Query 178943 AGTCTGGTTCAATCGCAC-GCCCGTCATCATCCAAATAATTGAGCACGGGGTCGTCCCTC 179001
| |||||||| || | | ||||| || || ||| | |||| || || |||
Sbjct 27134935 ACAAGGGTTCAAT-GCGCTGGCCGTCGTCCACCTGATACTGCAGCAAAGGATCATCCAAT 27134993
Query 179002 GGATCAAAGATTTTACGAGCATCCCTGGTGAGTTT--TGTGAAGATGTACCT--CGTTTG 179057
|| | | | || || | | || || | |||||||||||| | || |||
Sbjct 27134994 GGGTGATATATGAGTCGTGTAAGA--GGCGACATCAATGTGAAGATGTAACGAGCGCTTG 27135051
Query 179058 AGACGCATCTTTGCCACCCATGAGACGCGTCCCAAATTGACCACATGGCTCAAGGAGATT 179117
|| |||||| ||||| | | ||| || || || ||||| | || || || | |||
Sbjct 27135052 C-ACA-ATCTTTACCACCGGTCAAACGTGTGCCGAACTGACCGCGAGGTTCCAGCAAATT 27135109
Query 179118 GATATTGTTTGAACCCATGTAGTCATTGGCCAACTTGACAATCGT-ATCCGCGAGGGAGA 179176
||||||||| || || | | | | ||||| || || || || ||| || ||||| |
Sbjct 27135110 GATATTGTTCGATCCGACAAAATTCTGCGCCAAATTTACTATAGTCATCTGC-AGGGACA 27135168
Query 179177 CTTCACCGTGATGGTAAGCCGACTTGTCCGCCACATATGCCGCCAACTGCGCCACCTTCA 179236
|| ||||||||||| || ||| | || ||||| | | | | ||| || || || |
Sbjct 27135169 TCTCGCCGTGATGGTATGCTGACATTTCGGCCACCGACCCGGATAGCTGAGCAACTTTAA 27135228
Query 179237 TCTCATCCTTGAGGTTCTTGTGGAAGCACGCATACATCACCTTTCTTTGTGAAGGCTTGA 179296
||| |||| ||| | |||||||| | |||||||||| | || |||||| |
Sbjct 27135229 CCTCCCTCTTGTCGTTACGCTTGAAGCACGTAAACATCACCTTACGCTGACCAGGCTTTA 27135288
Query 179297 GGCCGTC 179303
|||| ||
Sbjct 27135289 GGCCATC 27135295
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618410632661680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |