Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20arizonae_20[refseq_20GCF_5F001654025.1_202016-05-09] 3,178 sequences; 141,386,800 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq2 91.5 2e-13 >seq2 Length=27840087 Score = 91.5 bits (100), Expect = 2e-13 Identities = 283/427 (66%), Gaps = 12/427 (3%) Strand=Plus/Plus Query 178883 AACCCGTGCCGATGCCTTCGGTTCCGTTCACGAGAACCATTGGAAGCGTTGGCATATAGA 178942 |||| ||||||||||| |||| || ||||| | |||||||||| | || ||||| Sbjct 27134875 AACCGGTGCCGATGCCCTCGGCGCCATTCACCAAGACCATTGGAATAATAGGTATATACC 27134934 Query 178943 AGTCTGGTTCAATCGCAC-GCCCGTCATCATCCAAATAATTGAGCACGGGGTCGTCCCTC 179001 | |||||||| || | | ||||| || || ||| | |||| || || ||| Sbjct 27134935 ACAAGGGTTCAAT-GCGCTGGCCGTCGTCCACCTGATACTGCAGCAAAGGATCATCCAAT 27134993 Query 179002 GGATCAAAGATTTTACGAGCATCCCTGGTGAGTTT--TGTGAAGATGTACCT--CGTTTG 179057 || | | | || || | | || || | |||||||||||| | || ||| Sbjct 27134994 GGGTGATATATGAGTCGTGTAAGA--GGCGACATCAATGTGAAGATGTAACGAGCGCTTG 27135051 Query 179058 AGACGCATCTTTGCCACCCATGAGACGCGTCCCAAATTGACCACATGGCTCAAGGAGATT 179117 || |||||| ||||| | | ||| || || || ||||| | || || || | ||| Sbjct 27135052 C-ACA-ATCTTTACCACCGGTCAAACGTGTGCCGAACTGACCGCGAGGTTCCAGCAAATT 27135109 Query 179118 GATATTGTTTGAACCCATGTAGTCATTGGCCAACTTGACAATCGT-ATCCGCGAGGGAGA 179176 ||||||||| || || | | | | ||||| || || || || ||| || ||||| | Sbjct 27135110 GATATTGTTCGATCCGACAAAATTCTGCGCCAAATTTACTATAGTCATCTGC-AGGGACA 27135168 Query 179177 CTTCACCGTGATGGTAAGCCGACTTGTCCGCCACATATGCCGCCAACTGCGCCACCTTCA 179236 || ||||||||||| || ||| | || ||||| | | | | ||| || || || | Sbjct 27135169 TCTCGCCGTGATGGTATGCTGACATTTCGGCCACCGACCCGGATAGCTGAGCAACTTTAA 27135228 Query 179237 TCTCATCCTTGAGGTTCTTGTGGAAGCACGCATACATCACCTTTCTTTGTGAAGGCTTGA 179296 ||| |||| ||| | |||||||| | |||||||||| | || |||||| | Sbjct 27135229 CCTCCCTCTTGTCGTTACGCTTGAAGCACGTAAACATCACCTTACGCTGACCAGGCTTTA 27135288 Query 179297 GGCCGTC 179303 |||| || Sbjct 27135289 GGCCATC 27135295 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618410632661680