Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20arizonae_20[refseq_20GCF_5F001654025.1_202016-05-09] 3,178 sequences; 141,386,800 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq1 329 1e-84 seq2 183 9e-41 seq3 174 5e-38 seq6 87.8 5e-12 >seq1 Length=29979347 Score = 329 bits (364), Expect = 1e-84 Identities = 968/1472 (66%), Gaps = 33/1472 (2%) Strand=Plus/Minus Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258 ||| | || || ||||| || || || || ||||| || | ||| | || ||| Sbjct 13817304 GCTGTTGGTATTGATTTGGGCACAACCTACTCTTGCGTGGGTGTGTTCCAGCATGGCAAG 13817245 Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 || || || ||||| || ||||| ||||| | || || ||||| || ||||| || || Sbjct 13817244 GTTGAGATCATTGCCAACGATCAGGGTAATCGTACCACCCCATCTTATGTTGCCTTCACG 13817185 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || || |||||| |||||||||| | || || || || | || || |||| | Sbjct 13817184 GAGACGGAGCGTTTGATTGGTGACGCCGCCAAGAACCAGGTGGCCATGAACCCAACCCAA 13817125 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACACAATCT 349438 || | || ||||||||||| || |||||| | | || ||| | || ||| Sbjct 13817124 ACTATCTTCGATGCTAAGCGTCTGATTGGTCGCAAATTCGATGATGCGGCCGTMCAGTCT 13817065 Query 349439 GATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGAG 349498 ||| | || || | ||||| || ||| || | | || || || | || ||| Sbjct 13817064 GATATGAAGCACTGGCCTTTCGAGGTCGTT---AACGTTGATGGCAAGCCCAAGATCGAG 13817008 Query 349499 GTTGAATATAAAGGTGAACAAAAACAATTT-TTACCCGAAGAAATTTCATCAATGGTTTT 349557 ||| || || | ||| || || | ||| || ||||| || || || || ||||| || Sbjct 13817007 GTTACGTACAAGGATGAG-AAGAAGACTTTCTTCCCCGAGGAGATCTCCTCCATGGTGTT 13816949 Query 349558 AGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTAT 349617 || |||||||| | || || || || | || | || || || |||| || || Sbjct 13816948 GACCAAGATGAAGGAGACCGCCGAGGCGTACCTGGGCAAGACGGTTACCAATGCCGTCAT 13816889 Query 349618 TACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCAT 349677 |||||| || |||||||| || ||| | |||||| || || || |||||||||| ||| Sbjct 13816888 TACTGTGCCCGCCTATTTCAACGATTCACAGCGTCAGGCTACCAAGGATGCTGGCACCAT 13816829 Query 349678 TGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGG 349737 || || || || || | | || || ||||| || |||||||| || || || ||||| Sbjct 13816828 CGCCGGTTTGAACGTATTGCGTATTATCAATGAGCCGACTGCTGCGGCCATCGCTTATGG 13816769 Query 349738 GCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTAC 349797 || || || | | || ||| ||| | | ||||| ||||| || |||||||| Sbjct 13816768 CCTGGACAAGAAGGCTGTTGGTGAACGTAATGTGTTGATTTTCGATTTGGGCGGTGGTAC 13816709 Query 349798 TTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGG 349857 ||||||||| || | || | |||| || || || || || || ||| | |||||||| Sbjct 13816708 TTTTGATGTCTCCATTCTGTCGATTGATGACGGCATCTTCGAGGTCAAATCTACTGCTGG 13816649 Query 349858 TGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAGA 349917 ||| || ||| | ||||| || ||||| || |||||||| || | || ||||| | || Sbjct 13816648 TGACACCCATTTGGGTGGTGAGGATTTCGACAATCGTCTAGTCACTCACTTTGTGCAGGA 13816589 Query 349918 ATTTAAGCGTCAAGC-TAAAATTGAT---ATTGGAGATAATCCTAGAGCAATGCGTCGCC 349973 || ||||| ||||| || | ||| | | | || | | || ||||||| | Sbjct 13816588 GTTCAAGCG-CAAGCACAAGAAGGATCTGACTACCAACAAGC---GTGCTCTGCGTCGTC 13816533 Query 349974 TAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTATTG 350033 || | ||||| ||||| ||||| |||||| | | || || ||||||| | |||| Sbjct 13816532 TACGCACTGCCTGTGAGCGTGCAAAGCGTACTCTTTCCTCATCTACCCAGGCGAGCATTG 13816473 Query 350034 AAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTTG 350093 | || ||||| || || || | || |||| | || ||||| || ||||| |||| Sbjct 13816472 AGATCGATTCGCTGTTCGAGGGTACCGACTTCTACACCTCGATTACGCGCGCTCGTTTTG 13816413 Query 350094 AAGAATTATGTATG--GATCTTTTTAG-AGCAACAATGGATCCTGTGGAAAAAGTATTAA 350150 |||| || | | ||||| || | ||| || ||||| || ||||| || | ||| Sbjct 13816412 AAGA--GCTGAACGCTGATCTGTTCCGCAGC-ACCATGGACCCCGTGGAGAAGGCATTGC 13816356 Query 350151 AAGATGCAAAAATGTCCAAAAATCAG--ATTGATGAAGTAGTTTTAGTTGGTGGTTCTAC 350208 ||||| ||| || | || || | ||| | || | || || || ||||| || || Sbjct 13816355 GTGATGCTAAATTG--GACAAGTCGGCCATTCACGATATTGTGTTGGTCGGTGGCTCCAC 13816298 Query 350209 ACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCTAG 350268 ||||| || || || || | || | || | || || ||||| || | | Sbjct 13816297 CCGTATCCCCAAGGTGCAGCGCCTATTGCAGGATCTGTTCAACGGCAAGGAGCTGAACAA 13816238 Query 350269 ATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATC 350328 || || || || ||||| |||||||| ||||||||||| || ||||| |||| || Sbjct 13816237 GTCCATCAACCCCGATGAGGCTGTTGCCTATGGTGCTGCCGTCCAGGCTGCTATCTTGCA 13816178 Query 350329 TGGAAATAAGAGTTCTAA--AATTG-ATGATCTATTACTACTAGATGTAACTCCACTTTC 350385 || | ||| || | || || | ||||| || || || ||||| || || || || Sbjct 13816177 CGGCGACAAG---TCGCAGGAAGTGCAGGATCTGTTGCTGCTCGATGTCACCCCCCTGTC 13816121 Query 350386 GCTTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACTGT 350445 ||| || | || || |||| | || |||| || | || | || | || | Sbjct 13816120 GCTGGGTATCGAGACCGCTGGCGGCGTGATGAGCGTGTTGATCAAGCGCAACACCACCAT 13816061 Query 350446 ACCTACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACAAT 350505 || ||||| || |||| || || | || | | || || ||||| | || || Sbjct 13816060 CCCCACAAAGCAGACCCAGACCTTCACCACCTACTCGGACAACCAGCCCGGTGTGTTGAT 13816001 Query 350506 TCAAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTTAC 350565 ||||| | |||||||| ||||| ||||| || |||||| |||| || || | Sbjct 13816000 CCAAGTCTACGAAGGTGAGCGTGCCATGACTAAGGACAATAAT-CTGTTGGGCAAGTT-C 13815943 Query 350566 CCTAAGT--GAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGAT 350623 || | |||||||| || | || || ||||||||||| || | ||||| Sbjct 13815942 GAGTTGTCGGGCATTCCACCCGCACCACGCGGTGTCCCTCAGATTGAGGTGACCTTCGAC 13815883 Query 350624 ATTGATTCAAATGGTATTTTAAATGTTACCGC 350655 |||||| | || |||||| | ||||| ||||| Sbjct 13815882 ATTGATGCCAACGGTATTCTGAATGTCACCGC 13815851 Score = 199 bits (220), Expect = 1e-45 Identities = 670/1037 (65%), Gaps = 18/1037 (2%) Strand=Plus/Plus Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258 || || || || || || || || || || || ||||||| ||||| || | | Sbjct 5776208 GCAATTGGTATTGACTTGGGAACCACCTACTCCTGTGTTGGTGTTTTCCAGCACGGCAAG 5776267 Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 || || ||||| || || || || || ||| | || ||||| || || ||||||||| Sbjct 5776268 GTGGAGATAATAGCCAACGACCAGGGCAACCGCACCACGCCCAGCTAYGTGGCATTTACC 5776327 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || | ||| | ||||||| || | || || || |||| || ||||||| || Sbjct 5776328 GACTCGGAGAGGTTGATTGGAGACGCGGCCAAGAACCAAGTGGCCATGAATCCAAGTAAC 5776387 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGA--CAAATCTACACAAT 349436 || || || ||||| ||||| | ||||| | | | | ||| | || | || Sbjct 5776388 ACTGTATTCGATGCGAAGCGTTTGATTGGACGTAAATATGATGATCCGAAGATTCAGGGC 5776447 Query 349437 CTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTG 349496 || | || || | || || | || || || ||| | | ||||||| || Sbjct 5776448 --GACATGAAGCACTGGCCATTCAAAGTGGTC---AACGACTGCGGCAAACCAAAGATAA 5776502 Query 349497 AGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTT 349556 | || || | ||||| ||||| || | ||| || || || || || |||||| Sbjct 5776503 ATGTCGAGTTCAAAGGCGAACAGAAGCGCTTTGCGCCGGAGGAGATCAGCTCGATGGTTC 5776562 Query 349557 TAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTA 349616 | || || |||||||| | || ||||| || || || || | | || || || | Sbjct 5776563 TGGTAAAGATGAAGGAGACGGCCGAAGCTTACTTGGGCACCACCATCAGAGACGCCGTCA 5776622 Query 349617 TTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCA 349676 | ||||| || ||||| || ||||| | |||||| ||||| ||||| || || || Sbjct 5776623 TCACTGTGCCTGCCTACTTCAATGACTCGCAGCGTCAAGCAACCAAAGACGCCGGTGCCA 5776682 Query 349677 TTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATG 349736 | || ||| | || || || | || || ||||| |||||||| ||||| | || |||| Sbjct 5776683 TCGCCGGGCTGAACGTGCTGCGCATCATCAATGAGCCCACTGCAGCAGCTCTGGCCTATG 5776742 Query 349737 GGCTTGATAAAATGAGTGACCAAGaaaaa---aaTATTCTTATTTTTGATTTAGGTGGTG 349793 | | || || || | | ||| || ||| |||| || || || || ||||| | Sbjct 5776743 GCTTGGACAA---GAATCTCAAAGGCGAACGCAATGTTCTAATATTCGACTTGGGTGGCG 5776799 Query 349794 GTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATT---TTTGAAGTTAAAGCAA 349850 | || || ||||| ||| | || || | || ||||| | || ||||| | ||| | Sbjct 5776800 GCACCTTCGATGTGTCAATCCTGACCATCGACGAGGGCTCTCTGTTYGAAGTGAGAGCCA 5776859 Query 349851 CTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTG 349910 ||||||| ||||| ||||| || ||||| || || || || | || || || || | Sbjct 5776860 CTGCTGGAGATACTCATCTGGGCGGAGAGGACTTCGACAACAGACTAGTCAACCACTTGG 5776919 Query 349911 TTAAAGAATTTAAGCGTCAAGCT-AAAATTGATATTGGAGATAATCCTAGAGCAATGCGT 349969 | || |||||||| |||| | |||| ||||| | ||||| ||||| ||||| Sbjct 5776920 CAGATGAGTTTAAGCG-CAAGTTTAAAAAGGATATGCGCTCCAATCCACGAGCACTGCGT 5776978 Query 349970 CGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCT 350029 || || | ||||| ||| | || ||||| | || || || | ||| || | | Sbjct 5776979 CGGCTGCGGACTGCAGCTGAGAGGGCAAAGCGCACATTGTCGTCAAGCACCGAAGCTACC 5777038 Query 350030 ATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGG 350089 || || || || | | ||| ||| | || |||| || ||| || || || Sbjct 5777039 ATCGAGATCGACGCGTTGTTTGAGGGCCATGACTTCTACACAAGGGTTAGCCGAGCGCGC 5777098 Query 350090 TTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTA 350149 || || || || ||| || || || | | ||| || | |||||||| || | | Sbjct 5777099 TTCGAGGAGTTGTGTGCCGACCTGTTCCGCGGCACACTGCAGCCTGTGGAGAAGGCTCTG 5777158 Query 350150 AAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACA 350209 || ||||| || ||| ||| | |||||| | || | || || ||||| || || ||| Sbjct 5777159 AATGATGCCAAGATGGACAAGAGCCAGATTCACGACATCGTCTTGGTTGGCGGCTCGACA 5777218 Query 350210 CGTATTCCAAAAGTTCA 350226 |||||||| || || || Sbjct 5777219 CGTATTCCGAAGGTGCA 5777235 Score = 181 bits (200), Expect = 3e-40 Identities = 556/853 (65%), Gaps = 13/853 (2%) Strand=Plus/Minus Query 349472 AAAGACGGTGATAAACCAATTATTGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTA 349531 || ||||| | || || | ||||| || |||| ||| || |||| || | ||| | Sbjct 6720501 AACGACGGGGGCAAGCCTAAAATTGAAGTCGAATTTAAGGGCGAACGCAAGCGTTTTGCA 6720442 Query 349532 CCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTA 349591 |||||||| || || ||||| || || ||| ||||| ||| || | ||| | Sbjct 6720441 CCCGAAGAGATCAGCTCCATGGTGTTGACGAAGATGCGGGAAACTGCCGAGGTCTATCTG 6720382 Query 349592 GGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGT 349651 || | |||| |||||||| ||||| || || || || || || ||| ||||||| Sbjct 6720381 GGCTCCAAGGTAAAGGATGCTGTCATTACGGTGCCGGCGTACTTCAACGATTCCCAGCGC 6720322 Query 349652 TCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAA 349711 || || |||||||||||| ||| || || || ||||| || | || || ||||| Sbjct 6720321 CAAGCGACTAAAGATGCTGGCTCCATAGCCGGTTTGAATGTGCTGCGCATCATCAATGAG 6720262 Query 349712 CCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAA---TGAGTGACCAAGaaaaaaaT 349768 || || || || || | || ||||| || || |||| ||| | ||| |||| Sbjct 6720261 CCGACGGCGGCTGCCCTCGCCTATGGCCTGGACAAAAATCTGA---AGGGAGAGCGAAAT 6720205 Query 349769 ATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAG 349828 | || || || ||||| || || || || ||||| || || |||| | | || ||| Sbjct 6720204 GTGCTGATCTTCGATTTGGGCGGCGGCACCTTTGACGTCTCCATACTCTCCATCGACGAG 6720145 Query 349829 GGA---ATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTT 349885 ||| | || ||||| || || || || |||||||| ||||| || || || ||||| Sbjct 6720144 GGATCGCTGTTCGAAGTGAAGGCTACGGCAGGTGATACGCATCTGGGCGGCGAGGATTTC 6720085 Query 349886 GATAATCGTCTCGTTTCGCATTTTGTTAAAGAATTTAAGCGTCAAGC-TAAAATTGATAT 349944 || ||||| || || || || || | || || ||||| ||||| || | | || Sbjct 6720084 GACAATCGGCTGGTCAATCACTTCGTGGAGGAGTTCAAGCG-CAAGCACAAGACCAACAT 6720026 Query 349945 TGGAGATAATCCTAGAGCAATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTC 350004 | ||| |||| |||||||||| | || || ||||| || || |||||| | Sbjct 6720025 CACCGGGAATGTGCGAGCTCTGCGTCGCCTGCGCACGGCCTGTGARCGGGCCAAGCGTAC 6719966 Query 350005 CTTATCATCTACTACCCAAACCTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTT 350064 | || || | ||| || |||| | || ||||| | || || |||| ||||| Sbjct 6719965 GCTCTCCTCCAGCACCGAAGCCTCGCTGGAGATTGACGCGCTGCACGAGGGCATTGATTT 6719906 Query 350065 CTTTTCATCTATTACACGTGCTCGGTTTGAAGAATTATGTATGGATCTTTTTAGAGCAAC 350124 || ||| || | |||||||| || || || | |||||||| || | | || Sbjct 6719905 CTACTCAAAGATATCGCGTGCTCGCTTCGAGGAGCTCAACATGGATCTCTTCCGCTCCAC 6719846 Query 350125 AATGGATCCTGTGGAAAAAGTATTAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGA 350184 || || || ||| | | | | ||||| |||||| ||| || || | || Sbjct 6719845 CATAGACCCAGTGCAGCGCGCTCTGAGCGATGCCAAAATGGACAAGAAGGCCATACACGA 6719786 Query 350185 AGTAGTTTTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTT 350244 || || |||| ||||| || |||||||| || || | || | | || || || Sbjct 6719785 TGTCGTCCTAGTCGGTGGCTCCACACGTATACCGAAGATCCAGCGCCTGCTGCAGGACTT 6719726 Query 350245 TTTTAATGGCAAAGAAC-CTTCTAGATCAATTAATCCAGATGAAGCTGTTGCATATGGTG 350303 ||| ||||| | | | || | || || ||||| || || || || || || |||| Sbjct 6719725 CTTTGGCGGCAAGCAGCTCAACTTG-TCCATCAATCCCGACGAGGCGGTAGCCTACGGTG 6719667 Query 350304 CTGCTGTTCAGGC 350316 |||| ||||| || Sbjct 6719666 CTGCCGTTCAAGC 6719654 Score = 91.5 bits (100), Expect = 4e-13 Identities = 115/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258 || || || |||||| | || || || || || || || | ||||||||| || || Sbjct 6721256 GCAATTGGTATCGATCTGGGCACCACCTACTCCTGCGTGGGTGTTTGGCAGAACAATAAA 6721197 Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 || || || ||||| ||||||||||| || | || ||||| || || || || |||| | Sbjct 6721196 GTTGAGATTATTGCCAATGATCAAGGCAATCGGACGACGCCCTCGTATGTGGCCTTTAAC 6721137 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCA 349356 || || ||||| | ||||| ||| | || |||||||| Sbjct 6721136 GACACAGAGCGCCTAATTGGCGATGCAGCTAAAAATCA 6721099 >seq2 Length=27840087 Score = 183 bits (202), Expect = 9e-41 Identities = 178/229 (78%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 140510 ACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGA 140569 ||||||||| | | || || | || | || ||||||||||| || || || || || Sbjct 14207445 ACCACCACGAAGGCGGAGCACCAAGTGCAAGGTTGACTCTTTTTGGATGTTGTAGTCGGA 14207504 Query 140570 TAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGG 140629 | || || |||||||| | ||| || ||||||||||||||||| |||||||| ||||| Sbjct 14207505 AAGAGTGCGACCATCTTCCAATTGCTTGCCAGCAAAGATTAGACGCTGCTGATCTGGAGG 14207564 Query 140630 AATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAAC 140689 |||||||||||| ||||| || || ||||| ||||| || || | ||| || ||||| || Sbjct 14207565 AATTCCTTCTTTGTCCTGGATCTTGGCTTTGACATTCTCGATGGTATCCGACGGTTCGAC 14207624 Query 140690 TTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 ||||| || | ||||| || ||||| ||||| ||||| ||||||||| Sbjct 14207625 CTCAAGAGTGATGGTCTTACCCGTTAGGGTTTTAACAAAGATCTGCATT 14207673 Score = 87.8 bits (96), Expect = 5e-12 Identities = 288/440 (65%), Gaps = 16/440 (4%) Strand=Plus/Minus Query 206448 CTGGTCAATATATCGAGCTGTTTTATTAAATACGCCTAGCATAGG-AATAATACCATTAG 206506 ||| |||| ||| || || ||||||||||| | || ||| || | |||| ||||| | Sbjct 27783914 CTGATCAACATAACGCGCGACATTATTAAATACTCTTAACATTGGTACTAAT-CCATTTG 27783856 Query 206507 AAGTTCCATTTGTTCCTCTAATATGA-CTGCCAGTCCCTCTAATATTATGTATATGTAAT 206565 |||| || || ||||| | ||| ||| |||| | ||| |||| || | || | | Sbjct 27783855 AAGTGCCGTTCGTTCCACAAAT-TGAGGTGCCTTTAGCTCGAATACAGTGAACATTAAGT 27783797 Query 206566 CCAATTCCTCCTGCCCATTTTGAAATATTAGCACATTCTTTTAATGTATTATAAATTCCA 206625 ||||| || |||||| | ||||| || | || |||| || | || ||| |||| || Sbjct 27783796 CCAATGCCACCTGCCGACTTTGATATCATTGCGCATTGTTCAACTGATTTAAAAATCCCT 27783737 Query 206626 TCAACACTATCACTTTCCATAGCAATTAAAAAACAAGAACTTAATTGTGGTCGTGGCGTT 206685 |||| |||| | |||| | | |||||| ||| |||||||| || || Sbjct 27783736 TCAATTGAATCAGACACTATAGTTAAAAGAAAACATGAAGACAATTGTGGACGATTTGTG 27783677 Query 206686 CCAGCATTAAATAAAGTAGGAGTAGCATGTGTAAAATATTTTTGAGACATTAAATTATAA 206745 | ||| ||| | ||| || | ||||| |||||| | | ||| | ||||| Sbjct 27783676 GCTGCAGCAAAAAGAGTTGGTGATGCATGAGTAAAAAAACGCTCAGATAGCAAATT---- 27783621 Query 206746 GTAGTTTTCACTTTTTCTAAATC---ATTTTCG---TGTAAACAAATTGCTACACGTAAC 206799 |||| ||||| | | |||| || |||| |||| || || || ||||| | Sbjct 27783620 GTAGGTTTCA--ACTGCAGAATCAATATCTTCGCCATGTATACCTATGGCGACACGCATT 27783563 Query 206800 CACATATATTGAGGTCTTTCAATTAtttttttGTTAATGTGCATTAAATATGCACGCTCA 206859 || || || |||||||| ||||||| || || | | ||||| | |||||| Sbjct 27783562 AGCAAATGCTGTGGTCTTTCTGCTATTTTTCCATTTATTTTTAGCAAATACGACCGCTCA 27783503 Query 206860 AGAGTTTTAAAGCCAAAATA 206879 || || || || ||||| || Sbjct 27783502 AGTGTCTTGAATCCAAAGTA 27783483 >seq3 Length=22052390 Score = 174 bits (192), Expect = 5e-38 Identities = 180/236 (76%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||||||||| | | || || |||||||| || ||||| || || ||||| | Sbjct 1975179 TTTGCATACCACCACGCAGACGGAGGACCAGATGAAGGGTCGACTCCTTCTGGATATTGT 1975120 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | ||||| || || || |||||||| ||||| || || || ||||| ||||| ||||||| Sbjct 1975119 AGTCAGACAAGGTGCGGCCATCTTCCAGTTGCTTGCCGGCGAAGATCAGACGCTGCTGAT 1975060 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 | || |||||||| || ||||| ||||| || || || || || ||||| | ||| || | Sbjct 1975059 CTGGTGGAATTCCCTCCTTATCTTGAATCTTGGCCTTGACGTTCTCAATGGTATCGGAAG 1975000 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 | ||||| || | || | |||||||| || | ||||| || || ||||||||| Sbjct 1974999 GCTCAACCTCCAAGGTGATGGTCTTTCCCGTCAAAGTTTTAACGAAGATCTGCATT 1974944 Score = 154 bits (170), Expect = 4e-32 Identities = 506/778 (65%), Gaps = 10/778 (1%) Strand=Plus/Minus Query 349544 TCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTA 349603 || || ||||| || || |||| ||| | || || || ||| | |||| || | Sbjct 14674974 TCCTCCATGGTGCTAACAAAGATGAGGGAGACCGCCGAGGCGTATCTGGGTGGCACGCTT 14674915 Query 349604 ACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAA 349663 || ||||| ||||| ||||| || ||||| || |||||| | ||| | || || || Sbjct 14674914 ACCGATGCCGTTATCACTGTGCCCGCCTACTTCAATGATTCGCAGAGGCAGGCCACCAAG 14674855 Query 349664 GATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCA 349723 ||||| ||| ||| || || | ||||| || | || || ||||| || || || || Sbjct 14674854 GATGCGGGCGTCATAGCCGGACTCAATGTGCTGCGCATCATCAATGAGCCAACGGCGGCG 14674795 Query 349724 GCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGAT 349783 || ||||| || || || || ||| | | | | ||| ||| | || || |||||| Sbjct 14674794 GCCATTGCCTACGGCCTGGACAAACAGGGCGGCAGTGAACGGAATGTGCTGATCTTTGAT 14674735 Query 349784 TTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTT 349843 | || || || || || ||||| || | || || | || || || || ||||| || Sbjct 14674734 CTGGGCGGCGGCACCTTCGATGTCTCCGTGCTGACCATCGAGGATGGCATCTTTGAGGTG 14674675 Query 349844 AAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCG 349903 || || || || || || || ||| | ||||| || || | || ||||| | || Sbjct 14674674 AAGGCCACGGCAGGCGACACCCATTTGGGTGGCGAGGACATCGACAATCGCATGGTCAAT 14674615 Query 349904 CATTTTGTTAAAGAATTTAAGCGTCAAGCTAAAATTGATATTGGAG--ATAATCCTAGAG 349961 || || | | || ||| |||| ||||| | || || || ||| | ||| | | Sbjct 14674614 CACTTCATGCAGGAGTTTCAGCG-CAAGC-ACAAGCGAGATCTGAGCCAGAATAAGCGCG 14674557 Query 349962 CAATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCC 350021 | |||| ||||| | || || ||||| || || ||||| | | || || | || | Sbjct 14674556 CTCTGCGACGCCTGCGTACGGCTTGTGAGCGGGCCAAGCGCACGCTCTCCTCCTCCACGC 14674497 Query 350022 AAACCTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACAC 350081 || || || || || || || || ||| |||| || || | | ||| | || | Sbjct 14674496 AAGCCAACATCGAGATCGACTCGCTCTTTGAGGGCATTGACTTTTACACGTCTTTGACGC 14674437 Query 350082 GTGCTCGGTTTGAAGAATTATGTATGGA--TCTTTTTAG-AGCAACAATGGATCCTGTGG 350138 | ||||| || || || | | | ||| ||| || | |||| || |||| || |||| Sbjct 14674436 GAGCTCGCTTCGAGGAGCT--GAACGGAGATCTGTTCCGGAGCACCA-TGGAGCCGGTGG 14674380 Query 350139 AAAAAGTATTAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTG 350198 || | || ||||| |||||| ||| |||||| |||| |||| | || | Sbjct 14674379 CCAAGGCGTTGCGGGATGCCAAAATGGACAAGGGTCAGATACATGACATAGTCCTGGTGG 14674320 Query 350199 GTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAG 350258 |||| || || || || || || || || | | || || || || |||||||||| Sbjct 14674319 GTGGCTCCACTCGGATACCCAAGGTGCAGCGCCTGCTGCAGGACTTCTTCAATGGCAAAG 14674260 Query 350259 AACCTTCTAGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGC 350316 | | | || || ||||| || || ||||| || ||||| ||||| ||||| || Sbjct 14674259 AGCTGAACAAGTCCATCAATCCGGACGAGGCTGTGGCCTATGGGGCTGCCGTTCAAGC 14674202 >seq6 Length=26536676 Score = 87.8 bits (96), Expect = 5e-12 Identities = 193/288 (67%), Gaps = 5/288 (2%) Strand=Plus/Minus Query 349532 CCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTA 349591 ||||| || || || | |||||| | | ||||||||||| | || ||||| || | Sbjct 23429333 CCCGAGGAGATCTCTGCCATGGTTCTCGGCAAAATGAAGGAGACGGCCGAAGCCTACCTG 23429274 Query 349592 GGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGT 349651 || | | || || | || || | ||||| || ||||| || || ||||||||||| Sbjct 23429273 GGCAAGAAGGTCACCCACGCCGTCGTCACTGTGCCCGCCTACTTCAACGATGCCCAGCGA 23429214 Query 349652 TCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAA 349711 || ||||| |||||||| |||||| || | | || | | || || || ||| Sbjct 23429213 CAGGCGACAAAGGATGCTGGAGTCATTGCCGGCCTGCAGGTGATGCGCATCATCAACGAA 23429154 Query 349712 CCCACTGCTGCAGCAATTGCATATGGGCTTGATAA-AATGAGTGACCAAGaaaaaaaTAT 349770 || || || || || ||||| || || || || || || ||| | || || || | Sbjct 23429153 CCGACCGCAGCTGCCATTGCCTACGGCCTGGACAAGAAGGAGGG----CGAGAAGAACGT 23429098 Query 349771 TCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAAC 349818 || | || ||||| || || ||||| || ||||| || || || || Sbjct 23429097 GCTGGTCTTCGATTTGGGCGGCGGTACCTTCGATGTCTCCCTGCTGAC 23429050 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515192701681934