Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20arizonae_20[refseq_20GCF_5F001654025.1_202016-05-09] 3,178 sequences; 141,386,800 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq2 87.8 1e-12 >seq2 Length=27840087 Score = 87.8 bits (96), Expect = 1e-12 Identities = 111/151 (74%), Gaps = 4/151 (3%) Strand=Plus/Plus Query 29669 TAGACGTGAGCATCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGA 29728 |||||||||||||| ||||| || |||||||| || || |||| || || || || || Sbjct 14040436 TAGACGTGAGCATCGCCCAGTGTATGGACAAAATCGCCGGGTTTTAAGCCCGTCACATGG 14040495 Query 29729 GCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGCCCCATG 29788 || |||||||| || | | | || ||||||||| || ||||| || || |||||| Sbjct 14040496 GCGATCATGTAGGTCAACAAGGCATACGAGGCGATGTTGAAAGGCACTCCCAGACCCATG 14040555 Query 29789 TC--CCCTGACCTCTGGTAGAGCTGGCACGA 29817 || | ||| | ||| || || ||||| || Sbjct 14040556 TCGGCGCTG--CGCTGATACAGTTGGCAGGA 14040584 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406147468537708