Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04]
5,523 sequences; 169,378,599 total letters
Query= NC_000872.1
Length=40739
Score E
Sequences producing significant alignments: (Bits) Value
seq1936 176 1e-39
>seq1936
Length=1051
Score = 176 bits (194), Expect = 1e-39
Identities = 402/594 (68%), Gaps = 16/594 (3%)
Strand=Plus/Plus
Query 1731 TCGATGTTTAGCGATAACACAGCTCTTGGTTTCGTATATCCCTACTTGGGTGAAGACGGT 1790
||||||||||| ||||||||||| || | || |||| ||| || | | | | | |
Sbjct 280 TCGATGTTTAGTGATAACACAGCGCTAGCGTTTGTATTTCCTTATCGTGATAATAATGAT 339
Query 1791 AGCCAAAAATGGCATATTGAACAACACAGTTTCATCCCGTGGCAACAGGCAGGGTCAATA 1850
| | | |||| |||| | || || || || || || ||||| | || || |||||
Sbjct 340 AAACCACGATGGTTTATTTATCAGCATAGCTTTATTCCCTGGCAGAAAGCCGGTTCAATT 399
Query 1851 GAAGCCAAAATTGAACAGGACGGTATCAACTACCGAGATTTAGAAACCAAGGGATTTTGT 1910
|| || ||| | || |||||||| ||||| || || |||| ||||||||||||
Sbjct 400 GAGGCTAAAGAAAAGCAAGACGGTATTAACTATCGGGACTTAGCTCAAAAGGGATTTTGT 459
Query 1911 ACAATTACAAGCCACCCACAAGGACTTATCAACCCAGAAGAAGTGTATCGCTGGTTTATA 1970
||||||| ||||| || |||||||| ||||| || |||| |||| ||||| |
Sbjct 460 ACAATTAGTAGCCATCCTCAAGGACTAATCAATGACGAGCAAGTTTATCAGTGGTTACTT 519
Query 1971 GATTATGTTGA-AGACAACTCACTTGACGTTGTCTTTTTTGGTTATGATGCCATGATGGT 2029
| | |||||| | || | ||| || ||||| || ||||||||||| | | || ||
Sbjct 520 AACTTTGTTGAGCGGCATC-GACTGGAAGTTGTTTTCTTTGGTTATGACG-CGTGGGGGC 577
Query 2030 TAA----TAAAATTATCAAAGCA-TTGGAATCTAATACAAGTTTTCCACT-CATGCCAAT 2083
||| || ||| ||||| | || | ||| | ||| ||| | || |||| |
Sbjct 578 TAACGCCTACAAT----CAAGCAGCTAGATTTAAATTCCGGTTGGCCATTGCAAGCCATT 633
Query 2084 CAGACAACGGACAAGTGAGCTAAAAGATCCTACAAAATTCCTTCAAACACTATTTATTGA 2143
| | || || || ||||| | || ||||| || || || | || || | ||| ||||
Sbjct 634 C-GGCAGCGAACTAGTGAATTGAAGGATCCAACTAAGTTTTTGCAGACGATGTTTGTTGA 692
Query 2144 GGGCAATATCACACGTCGT-GATGATGAAATCATGCGGAAAGCCTTAATAAATGCAGTTA 2202
||| | | || | | |||||| ||| ||| || || ||| ||||||| | |
Sbjct 693 AGGCTCGGT-AGACCGCTTGGATGATCGAATTATGGAAAAGGCATTACTAAATGCTGAAA 751
Query 2203 TTAAAGAGGACAACATTGGTATCCAAGTAGACAAAATGAAATCCACCTACAAGATTGACG 2262
|| | || ||||| |||||||| ||||| || ||| || |||| | |||||||| |
Sbjct 752 TTTATGAAGACAAAATTGGTATTCAAGTCGATAAAGCTAAGGCCACATTGAAGATTGATG 811
Query 2263 TGGTGGATGCTCTTATTGATGCTTTTTACGATGGCATGTATGCGTTTGAGGACT 2316
|||| ||||| | |||||||| || | | | |||||| ||||| ||||
Sbjct 812 TGGTAGATGCGTTAATTGATGCCTTATTTCAGGCTATGTATCACTTTGAAGACT 865
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 130234657918326
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |