Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04] 5,523 sequences; 169,378,599 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq5267 114 1e-20 >seq5267 Length=4296760 Score = 114 bits (126), Expect = 1e-20 Identities = 305/459 (66%), Gaps = 8/459 (2%) Strand=Plus/Plus Query 16193 AACATTAGACACG-CGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGA 16251 ||||| || |||| | |||||||| || || || ||||| | | ||| || |||||||| Sbjct 668737 AACATCAG-CACGGCAAAGTCGCAGTGCAGGCCCTCGTCGCGGGAGATGAGCTCGTTGGA 668795 Query 16252 AAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAA--TGAC 16309 || || | || ||||| || || ||||| | |||||| || | || || || | Sbjct 668796 GAAGGTCAGTCCCGGCATCAGACCGCGCTTCTTCAGCCAGAAAATGGAGGCGAAGCTGCC 668855 Query 16310 CCCGAAAAGAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCA 16369 | ||| ||| || ||||| || | ||||| || || | || ||| || | | || Sbjct 668856 GCTGAA--GAAGATGCCCTCGACGGCGGCAAAGGCAATGATGCGCTCCCCGAAGTTGGCC 668913 Query 16370 TCTTTATTACGA-ATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGT 16428 | || | || ||||| | |||| || || || | || | | ||| || Sbjct 668914 GCCTTGG-AGGAGATCCAGGAAAGGGCCCAGTCCGCCTTGCGCTTCACAGCGGGCATTGT 668972 Query 16429 TTCTATGGCCTTAAACAATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAG 16488 || ||||| || |||| | || | || ||| || || || || ||||| Sbjct 668973 CTCGATGGCGTTGAACAGGTATTCGCGCTGGTGCGGATCCCGGATGTAGGTGTCGATCAG 669032 Query 16489 TAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCG 16548 | ||||||||| || ||||| | |||||| ||||| ||||| || ||||||||||| || Sbjct 669033 CACACTGTACATCTCCGAGTGCACGTTCTCCATGGCGATCTGGAAGCCATAGAAGCAGCG 669092 Query 16549 AGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACC 16608 |||||||| || || || ||| | || || || |||||||||| || ||||| || Sbjct 669093 AGCCTCCGTGATCTGCACCTCCTGGCTGAAGCGCTCGACCAGGTTCTCGTTAACGATGCC 669152 Query 16609 GTCACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAA 16647 || || || || || |||| | |||| ||||| Sbjct 669153 ATCGGAGGCGGCGAAGAAGGCCAGCACGTGCGAGATGAA 669191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511379093228360