Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04]
5,523 sequences; 169,378,599 total letters
Query= NC_001875.2
Length=131995
Score E
Sequences producing significant alignments: (Bits) Value
seq5402 129 5e-25
seq5238 125 6e-24
seq5395 113 4e-20
seq5170 107 2e-18
seq5396 105 6e-18
>seq5402
Length=10656099
Score = 129 bits (142), Expect = 5e-25
Identities = 166/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006
|||| |||||||| | ||| |||| |||||| || |||||||| || ||||| || || |
Sbjct 571409 TTCCACCTCGCAGACGGAGAACCAAATGCAAGGTCGACTCCTTCTGGATGTTGTAATCAG 571468
Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066
|| || | ||||||| ||||| ||||| || | || || | |||||| || ||
Sbjct 571469 AAAGAGTGCGTCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGG 571528
Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126
| | || |||||||| |||||| ||||| | ||| || ||| ||||||
Sbjct 571529 GAATTCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCAGATGGCTCCA 571588
Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|||| ||| |||||||||||||| || || |||||||| || |||||
Sbjct 571589 CCTCCAGGGTGATGGTCTTGCCGGTCAAAGTCTTGACAAAGATCTGCAT 571637
Score = 120 bits (132), Expect = 3e-22
Identities = 167/234 (71%), Gaps = 0/234 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || ||||| | ||| |||| || | || |||||||| || ||||| ||||| | |
Sbjct 571639 CCACCGCGCAGACGGAGGACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 571698
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
||||| | |||||||||| || ||||| || | || || | |||||| || |||
Sbjct 571699 AGGGTACGTCCGTCCTCCAGTTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGG 571758
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||| |||||||| |||||| ||||| | | | || || |||||||
Sbjct 571759 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATCGTGTCGGAGGGCTCCACC 571818
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTGAAT 21182
|||| |||||||||||| || || || || || ||||| || ||||||||| ||
Sbjct 571819 TCCAAGGTAATGGTCTTACCAGTCAAGGTCTTCACAAAGATCTGCATTTTGGAT 571872
>seq5238
Length=3592495
Score = 125 bits (138), Expect = 6e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || || || | |||||||| || | || |||||||| || ||||| ||||| | |
Sbjct 2679460 CCACCGCGTAGGCGGAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 2679401
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
||||| || ||||||||||||| ||||| || | || || | |||||| || |||
Sbjct 2679400 AGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGG 2679341
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||| |||||||| |||||| ||||| | ||| || || ||||||
Sbjct 2679340 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATGGTGTCCGAAGGCTCCACC 2679281
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|||| ||| |||||||||||||| | ||||| || || ||||||||
Sbjct 2679280 TCCAAGGTGATGGTCTTGCCGGTGAGGGTTTTCACGAAGATTTGCAT 2679234
>seq5395
Length=2659632
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || ||||| | |||||||| || | ||||||||||| || ||||| ||||| | |
Sbjct 975531 CCACCACGCAGACGGAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 975590
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
||||| | ||||||||||||| || || || | || || | ||||||||| |||
Sbjct 975591 AGGGTGCGTCCGTCCTCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGG 975650
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| || |||||||| |||||| ||||| | ||| ||||| ||||||
Sbjct 975651 ATTCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCGATGGTATCGGAGGGCTCGACC 975710
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| | ||| ||||||||||| || | || || || || || |||||
Sbjct 975711 TCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 975757
Score = 102 bits (112), Expect = 7e-17
Identities = 161/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || || || | |||||||| || | ||||||||||| || ||||| || || | |
Sbjct 975759 CCACCACGGAGGCGGAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCGGAC 975818
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
||||| | ||||||||||||| || || || | || || | ||||||||| |||
Sbjct 975819 AGGGTGCGTCCGTCCTCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGG 975878
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| || |||||||| |||||| || || | ||| || || ||||||
Sbjct 975879 ATTCCCTCCTTGTCCTGGATCTTGGCCTTAACATTCTCGATGGTGTCGGAGGGCTCGACC 975938
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTG 21179
|| | ||| ||||||||||| || | || || || || |||||||| |||
Sbjct 975939 TCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAAATTTGCATGTTG 975989
>seq5170
Length=6624210
Score = 107 bits (118), Expect = 2e-18
Identities = 228/336 (68%), Gaps = 11/336 (3%)
Strand=Plus/Minus
Query 23617 CCAATGATGCCGCAGCCCAGCCGGCCGCCAGAATTGCCCGTGGTCTTGCTGAGCGGGTGC 23676
|| |||| ||||||||| | ||| | || | || ||||||| |||||| ||| |||
Sbjct 512635 CCGATGACGCCGCAGCCAATGCGGGCACCTGCGTTTCCCGTGGACTTGCTCAGCTCGTGG 512576
Query 23677 TCGCCGAGGCCCAGGTCATCGCGGTCCGTGTGCACGACCAGGCTGCGGCCCAATATACTC 23736
| || |||| || |||||| || | ||| || || | | |||| || | || ||
Sbjct 512575 CCACCCTGGCCGAGATCATCGGCATCGGCGTGGACCACAACGGTGCGCCCGATGATGCTG 512516
Query 23737 AACGGC-CCAAACAGGGTTATCACGTTGTCGCTCATGTGTATGGCCGTGAGTGCGGTGCA 23795
|||| || ||||| || ||| |||| | |||| || || || | || ||
Sbjct 512515 T-CGGCGCCGAACAGCGTGATCTTCGAGTCGGTGATGT---TGACCTTG---GTGGGACA 512463
Query 23796 GCCCGCAGAGCGCACG---TTGCCCAGGTCGCCGACGTGTCGCTCCGCGGCGTCGGGCGC 23852
| | | | | | || ||||||||||| || | ||| || | | || || |||| ||
Sbjct 512462 GTCGCCGGTGGCCTCGATGTTGCCCAGGTCTCCCAGGTGACGGTTCTCGTCGGCGGGAGC 512403
Query 23853 GCCGTGTCTCTGGCGGGTGGGGTTAAAGTGCTCGCCAGCGGACGTGCAGCCGTTGCTGGT 23912
||||| || || | ||| || |||||| || | ||| ||||||||||| || |
Sbjct 512402 TCCGTGCTCCTTGCCGTAGGGATTGAAGTGCGGTCCGGACGACATGCAGCCGTTGGTGTT 512343
Query 23913 GTCGCCGAATTCGTGCACGTGAAAACCGTGCAGCCC 23948
||| ||||| ||||| ||||| || |||||||| ||
Sbjct 512342 GTCCCCGAACTCGTGTACGTGGAATCCGTGCAGGCC 512307
>seq5396
Length=9561034
Score = 105 bits (116), Expect = 6e-18
Identities = 162/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || ||||| | ||||||| ||||||||||||||||| |||||||||||||| |
Sbjct 8331077 CCACCACGCAGACGCAGCACCAAGTGCAAAGTGGACTCCTTCTGAATGTTATAGTCAGAG 8331018
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
||||| || | || |||||||| ||||| || | || || | |||||| || ||
Sbjct 8331017 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGGA 8330958
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||||| ||||| ||||| ||| || | ||| |||||| || ||
Sbjct 8330957 ATTCCTTCTTTGTCCTGAATCTTGGCTTTGACATTTTCGATAGTATCCGAAGGTTCGACC 8330898
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTG 21179
|| | || ||||||||||| || | || || || || || ||||| |||
Sbjct 8330897 TCAAGCGTGATGGTCTTGCCCGTGAGGGTCTTAACGAAGATCTGCATCTTG 8330847
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 422230777073468
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