Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04]
5,523 sequences; 169,378,599 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq5267 544 8e-150
seq5238 150 2e-31
seq5395 147 2e-30
seq5170 132 5e-26
seq5396 127 2e-24
seq5402 118 1e-21
>seq5267
Length=4296760
Score = 544 bits (602), Expect = 8e-150
Identities = 595/785 (76%), Gaps = 8/785 (1%)
Strand=Plus/Minus
Query 116655 AGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGACACGAGCGACT 116714
|||| ||||| || ||||||||||| ||||||||||| || ||||||||| || |||||
Sbjct 669280 AGGCTGAGGCCTCTTTCTGGACCGTGGAGGAGGTGGATCTCTCCAAGGACCTGACCGACT 669221
Query 116715 GGGAGCGCTTGAACGACAACGAGCGCCATTTCATCAAGCACGTGCTGGCCTTTTTCGCCG 116774
|| | ||| |||| ||| |||||||||| |||||| ||||||||||||||| |||||||
Sbjct 669220 GGCACCGCCTGAAGGACGACGAGCGCCACTTCATCTCGCACGTGCTGGCCTTCTTCGCCG 669161
Query 116775 CCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTCGCTCAGGAGGTGCAGGTGG 116834
|| ||| |||||||| |||||||| ||||||||||| ||| |||||||||||| |
Sbjct 669160 CCTCCGATGGCATCGTTAACGAGAACCTGGTCGAGCGCTTCAGCCAGGAGGTGCAGATCA 669101
Query 116835 CCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGAGAACGTGCACTCGGAAATGT 116894
| ||||| || |||||||| ||||| ||||||||||||||||||||||||||||| ||||
Sbjct 669100 CGGAGGCTCGCTGCTTCTATGGCTTCCAGATCGCCATGGAGAACGTGCACTCGGAGATGT 669041
Query 116895 ATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGAGGAGAAGC---TCCGTTTGTTGA 116951
| || |||||||| ||| | || | || | || || | | | ||| |
Sbjct 669040 ACAGTGTGCTGATCGACACCTACATCCGGGATCCGCACCAGC-GCGAATACCT--GTTCA 668984
Query 116952 ACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGGATCG 117011
||||||||||||| ||||| || || ||||| || ||||| || |||||||
Sbjct 668983 ACGCCATCGAGACAATGCCCGCTGTGAAGCGCAAGGCGGACTGGGCCCTTTCCTGGATCT 668924
Query 117012 CCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCT 117071
|| || | |||| |||||| |||||| | | ||||| || |||||||||||| |||
Sbjct 668923 CCTCCAAGGCGGCCAACTTCGGGGAGCGCATCATTGCCTTTGCCGCCGTCGAGGGCATCT 668864
Query 117072 TCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCC 117131
|||| ||||| |||||| |||| || ||||| ||||| ||||| || ||||| || |
Sbjct 668863 TCTTCAGCGGCAGCTTCGCCTCCATTTTCTGGCTGAAGAAGCGCGGTCTGATGCCGGGAC 668804
Query 117132 TGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTGTT 117191
|||| ||| |||||||||||||||| | |||||||| ||||| ||||||||||||
Sbjct 668803 TGACCTTCTCCAACGAGCTCATCTCCCGCGACGAGGGCCTGCACTGCGACTTTGCCGTGC 668744
Query 117192 TGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCG-GCGCGCGTCAGGGAGATCGTCACC 117250
|| ||||| |||| |||||||||||||| || ||| | |||| ||| |||||| || |
Sbjct 668743 TGATGTTCCAGCACTTGGTGCAGCGACCCAG-GCGCGAGCGCATCATCGAGATCATCCGC 668685
Query 117251 GACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAGCGCTGCCGGTGCGTCTGCTGGGA 117310
|| || || ||||| |||||| ||||||||||| || |||| || || | ||
Sbjct 668684 GATGCTGTGGCCATAGAGCAGGAGTTCCTCACCGATGCCTTGCCCGTAAACCTCATCGGC 668625
Query 117311 CTCAATTGCGAAACGATGTCGCAATACATCGAGTTCGTCGCCGACAGGCTGCTGCTCGAG 117370
| |||||||| |||||||| |||||||| ||||| || || | |||||| | |||
Sbjct 668624 ATGAATTGCGACCTCATGTCGCAGTACATCGAATTCGTGGCGGATCGTCTGCTGGTGGAG 668565
Query 117371 CTGGTCGGCGCCAAGCACTACAACACGCCCAACCCGCTGGACTTTATGAACCTCATCTCC 117430
|||| || | |||| |||||| || ||||| | |||| ||| | | |||||
Sbjct 668564 CTGGGCGTTGGCAAGATCTACAATACCAAGAACCCCTTCAACTTCATGGAGATGATCTCG 668505
Query 117431 TTGGA 117435
||||
Sbjct 668504 CTGGA 668500
>seq5238
Length=3592495
Score = 150 bits (166), Expect = 2e-31
Identities = 163/216 (75%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| ||||| ||||| ||||| ||||| ||||||||| | || || || | |
Sbjct 2679234 ATGCAAATCTTCGTGAAAACCCTCACCGGCAAGACCATCACCTTGGAGGTGGAGCCTTCG 2679293
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | | | |||| || || | ||||| |||||||||||| | || |||
Sbjct 2679294 GACACCATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCAGATCAG 2679353
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| || || |||| ||| ||||| |||||||| |||| |||||||| ||||||||||
Sbjct 2679354 CAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGCACCCTGTCCGACTACAAC 2679413
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGC 40905
|||||||||||| | || || || || ||| | |||
Sbjct 2679414 ATCCAGAAGGAGTCGACCCTCCACCTGGTGCTCCGC 2679449
>seq5395
Length=2659632
Score = 147 bits (162), Expect = 2e-30
Identities = 172/230 (75%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || || || ||||| ||||||||| | || ||||| || ||
Sbjct 975757 ATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTTGAGGTCGAGCCCTCC 975698
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|| | | | | |||| | |||| || || | ||||| ||||| |||||| | |||||
Sbjct 975697 GATACCATCGAGAACG-TGAAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCAGACCA 975639
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| || || |||| ||| || || |||||||| |||| |||||||| |||||||||
Sbjct 975638 GCAGCGTCTGATCTTCGCCGGAAAGCAGCTGGAGGACGGACGCACCCTGTCCGACTACAA 975579
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGCG 40918
||||||||||||| |||| || || | ||| | || || | || ||||
Sbjct 975578 CATCCAGAAGGAGTCCACCCTCCACTTGGTGCTCCGTCTGCGTGGTGGCG 975529
Score = 147 bits (162), Expect = 2e-30
Identities = 164/219 (75%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746
|| |||||||| ||||| || || || || ||||| ||||||||| | || ||||| ||
Sbjct 975988 AACATGCAAATTTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTTGAGGTCGAGCCC 975929
Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806
|||||| | | | | | |||| || || | ||||| ||||| |||||| | |||
Sbjct 975928 TCCGACACCATCGAGAATGTTAAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCAGAC 975869
Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866
||||| || || |||| ||| || || |||||||| |||| |||||||| ||| |||
Sbjct 975868 CAGCAGCGTCTGATCTTCGCCGGAAAGCAGCTGGAGGACGGACGCACCCTGTCCGATTAC 975809
Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGC 40905
||||||||||||||| |||| || || | ||| | |||
Sbjct 975808 AACATCCAGAAGGAGTCCACCCTCCACTTGGTGCTCCGC 975770
>seq5170
Length=6624210
Score = 132 bits (146), Expect = 5e-26
Identities = 233/336 (69%), Gaps = 5/336 (1%)
Strand=Plus/Plus
Query 139373 GGCCTGCACGGCTTCCACGTGCACGAGTTCGGCGACGCGAGCAACGGGTGCACGTCGGCC 139432
||||||||||| |||||||| ||||||||||| ||| | |||||| |||| |||| ||
Sbjct 512307 GGCCTGCACGGATTCCACGTACACGAGTTCGGGGACAACACCAACGGCTGCATGTCGTCC 512366
Query 139433 GGCGAGCACTTCAACCCCGCGCGCCGGGACCACGGCGCGCCCGACGCCGAGATCAGGCAC 139492
|| ||||||||| ||| || ||| ||||| || |||| || ||||| | | |||
Sbjct 512367 GGACCGCACTTCAATCCCTACGGCAAGGAGCACGGAGCTCCCGCCGACGAGAACCGTCAC 512426
Query 139493 GTCGGCGACCTGGGCAACCTCGAGTCGGCGGGCCGCGACGCGCTCACCGAGGTGAGCCTG 139552
| || |||||||||||| |||| ||| | ||||| | |||| |||| | | |
Sbjct 512427 CTGGGAGACCTGGGCAACATCGA---GGCCACCGGCGACTGTCCCACCAAGGTCAACATC 512483
Query 139553 ACGGACGGCGTCG-TGTCCCTGTACGGTCCGCACAGCATCATCGGACGGAGTCTGGTCGT 139611
|| ||| || | | | |||| ||| | ||||||||||||| || | | || ||
Sbjct 512484 ACCGAC-TCGAAGATCACGCTGTTCGGCGCCGACAGCATCATCGGGCGCACCGTTGTGGT 512542
Query 139612 GCACACGGACAGGGACGATCTGGGCCTCACCGACCATCCATTGAGCAAGACCACCGGCAA 139671
||| | || || ||||| |||| | ||| |||||||| |||| || ||
Sbjct 512543 CCACGCCGATGCCGATGATCTCGGCCAGGGTGGCCACGAGCTGAGCAAGTCCACGGGAAA 512602
Query 139672 CTCGGGCGGCCGGCTCGCGTGCGGCATCATCGGGAT 139707
| | || | ||| | | |||||| ||||||| ||
Sbjct 512603 CGCAGGTGCCCGCATTGGCTGCGGCGTCATCGGCAT 512638
>seq5396
Length=9561034
Score = 127 bits (140), Expect = 2e-24
Identities = 159/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746
|| ||||| || ||||| || || ||||||||||| |||||||| | || |||||| |
Sbjct 8330848 AAGATGCAGATCTTCGTTAAGACCCTCACGGGCAAGACCATCACGCTTGAGGTCGAACCT 8330907
Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806
| || | | ||| |||| | || |||| |||||||| || || || | ||
Sbjct 8330908 TCGGATACTATCGAAAATGTCAAAGCCAAGATTCAGGACAAAGAAGGAATTCCTCCAGAT 8330967
Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866
||||| || || |||| ||| ||||| |||||||| || | ||||||||| |||||
Sbjct 8330968 CAGCAGCGTCTGATCTTCGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCTGACTAT 8331027
Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904
||||| ||||||||| |||| |||| | ||| ||||
Sbjct 8331028 AACATTCAGAAGGAGTCCACTTTGCACTTGGTGCTGCG 8331065
>seq5402
Length=10656099
Score = 118 bits (130), Expect = 1e-21
Identities = 152/207 (73%), Gaps = 2/207 (1%)
Strand=Plus/Minus
Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746
|||||||| || || || || || | || || || ||||| ||| | || || || ||
Sbjct 571868 AAAATGCAGATCTTTGTGAAGACCTTGACTGGTAAGACCATTACCTTGGAGGTGGAGCCC 571809
Query 40747 ACCGACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805
|||||| | || || | | |||| || || | ||||| |||||||||||| | ||
Sbjct 571808 TCCGACACGATTGAGAATG-TGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCAGA 571750
Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865
||||| || || |||| ||| ||||| || ||||| |||| || ||||| ||||||
Sbjct 571749 TCAGCAGCGTCTGATCTTCGCCGGCAAGCAACTGGAGGACGGACGTACCCTGTCCGACTA 571690
Query 40866 CAACATCCAGAAGGAGGCCACGCTGCA 40892
|||||||||||||||| | || || ||
Sbjct 571689 CAACATCCAGAAGGAGTCGACCCTTCA 571663
Score = 105 bits (116), Expect = 7e-18
Identities = 150/206 (73%), Gaps = 4/206 (2%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || || || || | || ||||| ||||||||| | || || || |||| |
Sbjct 571637 ATGCAGATCTTTGTCAAGACTTTGACCGGCAAGACCATCACCCTGGAGGTGGA-GCCATC 571579
Query 40750 -GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807
|||| | | | |||| | |||| || || | ||||| ||||| || ||| | || |
Sbjct 571578 TGACACCATCGAGAACG-TGAAGGCCAAGATCCAGGACAAGGAGGGAATTCCCCCAGATC 571520
Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867
|||| || || |||| ||| ||||| ||||| || |||| ||||| || || ||||
Sbjct 571519 AGCAGCGTCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGACGCACTCTTTCTGATTACA 571460
Query 40868 ACATCCAGAAGGAGGCCACGCTGCAT 40893
|||||||||||||| | || |||||
Sbjct 571459 ACATCCAGAAGGAGTCGACCTTGCAT 571434
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515183630554480
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