Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04] 5,523 sequences; 169,378,599 total letters Query= NC_002072.2 Length=34815 Score E Sequences producing significant alignments: (Bits) Value seq1936 156 9e-34 >seq1936 Length=1051 Score = 156 bits (172), Expect = 9e-34 Identities = 407/614 (66%), Gaps = 10/614 (2%) Strand=Plus/Plus Query 2270 GCGAGTTTATGTAGGATTGGATGCATCAATGTTCAGCGATAATACAGCCATTGGCTTCGT 2329 || ||||||| | || || ||| || ||||| || ||||| ||||| | | || || Sbjct 255 GCAAGTTTATATTGGCTTTGATTACTCGATGTTTAGTGATAACACAGCGCTAGCGTTTGT 314 Query 2330 CTATCCATACGTTGGTGAAGATGGAAGTCAAAAATGGCATATCGAACAGCACAGTTTTAT 2389 | ||| || || | | ||| | | | |||| ||| | ||||| || ||||| Sbjct 315 ATTTCCTTATCGTGATAATAATGATAAACCACGATGGTTTATTTATCAGCATAGCTTTAT 374 Query 2390 CCCATGGCAACAAGCGGGCTCGTTAGAAGCCAAAATGGAACAAGACGGTGTTAATTACCG 2449 || ||||| |||| || || | || || ||| | ||||||||| |||| || || Sbjct 375 TCCCTGGCAGAAAGCCGGTTCAATTGAGGCTAAAGAAAAGCAAGACGGTATTAACTATCG 434 Query 2450 TGATCTAGAACAGAAAGGCTACTGTACCATCACAAGCCACCCACAAGGGCTTATCAATCC 2509 || ||| || || || | ||||| || | ||||| || ||||| || |||||| Sbjct 435 GGACTTAGCTCAAAAGGGATTTTGTACAATTAGTAGCCATCCTCAAGGACTAATCAATGA 494 Query 2510 AGAGGAAGTTTACCGCTGGTTTATTGATTATGTTGAAGACAATCAGCTTGATGTCGTTTT 2569 ||| ||||||| | ||||| || | | |||||| ||| || || || ||||| Sbjct 495 CGAGCAAGTTTATCAGTGGTTACTTAACTTTGTTGAGCGGCATCGACTGGAAGTTGTTTT 554 Query 2570 CTTCGGCTATGACGCCATGATGACTGA----TAAAATAATAAAAAGTCTTGAATCTAATA 2625 ||| || |||||||| || | || | || ||| | | || || || | ||| Sbjct 555 CTTTGGTTATGACGCG-TGGGGGCTAACGCCTACAATCA--AGCAG-CTAGATTTAAATT 610 Query 2626 CAAATTTCCCACTA-ATGCCAATAAGACAACGTACAAGTGAGCTAAAAGACCCTACAAAA 2684 | || ||| | | |||| | | || || || ||||| | || || || || || Sbjct 611 CCGGTTGGCCATTGCAAGCCATTCGG-CAGCGAACTAGTGAATTGAAGGATCCAACTAAG 669 Query 2685 TTCCTTCAAACGCTATTTATCGAAGGCAATATCACTCGCTTGGATGATGAGATTATGCGT 2744 || | || ||| | ||| | |||||| | |||||||||||| |||||| Sbjct 670 TTTTTGCAGACGATGTTTGTTGAAGGCTCGGTAGACCGCTTGGATGATCGAATTATGGAA 729 Query 2745 AAAGCCTTGATAAATGCGGTAATCAAAGAAGATAACATCGGTATTCAGGTCGATAAAATG 2804 || || || ||||||| | ||| | ||||| || || |||||||| ||||||||| Sbjct 730 AAGGCATTACTAAATGCTGAAATTTATGAAGACAAAATTGGTATTCAAGTCGATAAAGCT 789 Query 2805 AAATCCACTTACAAAATTGACGTGGTGGATGCGATTATCGATGCGTTCTATGACGGTATG 2864 || |||| | || ||||| ||||| |||||| | || ||||| || | | | | |||| Sbjct 790 AAGGCCACATTGAAGATTGATGTGGTAGATGCGTTAATTGATGCCTTATTTCAGGCTATG 849 Query 2865 TATGCGTTTGAAGA 2878 ||| |||||||| Sbjct 850 TATCACTTTGAAGA 863 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 111279101211902