Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04] 5,523 sequences; 169,378,599 total letters Query= NC_002185.1 Length=35466 Score E Sequences producing significant alignments: (Bits) Value seq1936 168 2e-37 >seq1936 Length=1051 Score = 168 bits (186), Expect = 2e-37 Identities = 386/573 (67%), Gaps = 20/573 (3%) Strand=Plus/Plus Query 13026 GTCTATGTTGGTCTTGATGCTTCAATGTTTAGTGATAACACGGCAATCGGTTTTGTTTAC 13085 || ||| |||| ||||| || ||||||||||||||||| || | | ||||| | Sbjct 259 GTTTATATTGGCTTTGATTACTCGATGTTTAGTGATAACACAGCGCTAGCGTTTGTATTT 318 Query 13086 CCGTATTTGGGTGAAGACGGCAGTCAAAAATGGCATGTAGAACAGCATAGCTTTATTCCT 13145 || ||| | | | | | | | | |||| | | | ||||||||||||||||| Sbjct 319 CCTTATCGTGATAATAATGATAAACCACGATGGTTTATTTATCAGCATAGCTTTATTCCC 378 Query 13146 TGGCAACAAGCAGGTTCGCTTGAGGCTAAGATGGAACAAGATGGTGTCAATTATCGAGAT 13205 ||||| |||| ||||| |||||||||| | ||||| ||| | || ||||| || Sbjct 379 TGGCAGAAAGCCGGTTCAATTGAGGCTAAAGAAAAGCAAGACGGTATTAACTATCGGGAC 438 Query 13206 TTAGAAGAAAAAGGCTACTGTACCATCACAAGCCATCCACAAGGACTTATCAATCCAGAG 13265 |||| |||| || | ||||| || | |||||||| |||||||| |||||| ||| Sbjct 439 TTAGCTCAAAAGGGATTTTGTACAATTAGTAGCCATCCTCAAGGACTAATCAATGACGAG 498 Query 13266 GAGGTTTATCGCTGGTTTTGTGATTATGTCGA-AGACAACGCACTTGACGTTGTCTTTTT 13324 | ||||||| ||||| | | | ||| || | || || ||| || ||||| || || Sbjct 499 CAAGTTTATCAGTGGTTACTTAACTTTGTTGAGCGGCATCG-ACTGGAAGTTGTTTTCTT 557 Query 13325 TGGTTACGACGCTATGGGTGTGTCTAA----GATTATCAAGGCCTTGGAGTCTAACACGA 13380 |||||| ||||| |||| | |||| | |||||| | || | || | Sbjct 558 TGGTTATGACGC-GTGGG---GGCTAACGCCTACAATCAAGCAGCTAGATTTAAATTCCG 613 Query 13381 GCTTTCCACT-TATGCCAATTAGGCAGCGTACAAGCGAATTGAAAGACCCTACAAAATTC 13439 | | ||| | | ||| ||| ||||||| || || |||||||| || || || || || Sbjct 614 GTTGGCCATTGCAAGCC-ATTCGGCAGCGAACTAGTGAATTGAAGGATCCAACTAAGTTT 672 Query 13440 CTTCAAACGCTATTTATCGAAGGAAATATCACTCGAC----TAGATGATGAAATAATGCG 13495 | || ||| | ||| | ||||| || | ||| | |||||| ||| ||| Sbjct 673 TTGCAGACGATGTTTGTTGAAGG----CTCGGTAGACCGCTTGGATGATCGAATTATGGA 728 Query 13496 AAAAGCCTTGATAAATGCTGTGATTAAAGAGGATAACATCGGTATCCAAGTAGACAAAAT 13555 ||| || || ||||||||| ||| | || || || || ||||| ||||| || ||| Sbjct 729 AAAGGCATTACTAAATGCTGAAATTTATGAAGACAAAATTGGTATTCAAGTCGATAAAGC 788 Query 13556 GAAGTCAACTTATAAGATTGACGTTGTAGATGC 13588 ||| | || | |||||||| || |||||||| Sbjct 789 TAAGGCCACATTGAAGATTGATGTGGTAGATGC 821 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 113362164583928