Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04] 5,523 sequences; 169,378,599 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq4739 104 5e-17 >seq4739 Length=5756469 Score = 104 bits (114), Expect = 5e-17 Identities = 263/393 (67%), Gaps = 14/393 (4%) Strand=Plus/Minus Query 253995 GGCGACCTTCCTCATTTGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATC 254054 || ||||| || | |||| || |||| || ||||| |||||||| || || ||| Sbjct 3763326 GGGGACCTGCCCAACATGCTGCTCTACGGCCCGCCCGGCACAGGCAAAACCAGTACGATC 3763267 Query 254055 CTGGCGCTGGCCCGAACCCTGTTGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTG 254114 ||||| ||| || | | | || || | | | ||| ||| | ||||| ||| Sbjct 3763266 CTGGCC---GCCGGACGGCAGATCTTCGGGGATATGTTCAAAGACCGCATCCTCGAACTG 3763210 Query 254115 AACGCTTCTGACGAACGCGGGTTGGACGTCGTCCGCGACAAGATCAAGACTTTCTCCAAG 254174 ||||| || ||||| || || | | || || ||| ||||||||||| ||||| || Sbjct 3763209 AACGCCTCCGACGAGCGGGGCATCAATGTGGTGCGCACCAAGATCAAGAACTTCTCGCAG 3763150 Query 254175 ATGTCGATTTC----GT-CGTTCCAAC--CCGGC--TGTCCGCCTTTCAAGCTCGTGATC 254225 | ||| | || ||| | | | ||| |||||||| || ||| || | ||| Sbjct 3763149 CTCTCGGCTAGCAGTGTGCGTCCGGATGGCAGGCCGTGTCCGCCCTTTAAGATCATCATC 3763090 Query 254226 CTGGACGAGGCGGACACCATGACGGCCGACGCGCAGTCCGCCCTCCGCCGAACGATGGAG 254285 ||||||||||| ||| | ||||| | ||| ||||| ||||| || || || |||||| Sbjct 3763089 CTGGACGAGGCTGACTCGATGACCCATGCCGCCCAGTCAGCCCTGCGTCGCACCATGGAG 3763030 Query 254286 ACGCA-CTCCGTTGTGACGCGTTTTTGCCTGGTGTGCAACTACGTGTCGAAGATCATCGC 254344 | | | ||| | || || || |||||| | || |||||||| || | |||||| | Sbjct 3763029 AAGGAGAGCCGCAG-CACCCGCTTCTGCCTGATATGTAACTACGTCTCCAGGATCATTGT 3762971 Query 254345 CCCGCTGGCTTCTCGGTGCGCCAAGTTTCGATT 254377 || | | || || ||| ||||||| || || Sbjct 3762970 GCCCATTACCTCGCGCTGCTCCAAGTTCCGCTT 3762938 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073690416598464