Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04]
5,523 sequences; 169,378,599 total letters
Query= NC_002687.1
Length=335593
Score E
Sequences producing significant alignments: (Bits) Value
seq4739 104 5e-17
>seq4739
Length=5756469
Score = 104 bits (114), Expect = 5e-17
Identities = 263/393 (67%), Gaps = 14/393 (4%)
Strand=Plus/Minus
Query 253995 GGCGACCTTCCTCATTTGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATC 254054
|| ||||| || | |||| || |||| || ||||| |||||||| || || |||
Sbjct 3763326 GGGGACCTGCCCAACATGCTGCTCTACGGCCCGCCCGGCACAGGCAAAACCAGTACGATC 3763267
Query 254055 CTGGCGCTGGCCCGAACCCTGTTGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTG 254114
||||| ||| || | | | || || | | | ||| ||| | ||||| |||
Sbjct 3763266 CTGGCC---GCCGGACGGCAGATCTTCGGGGATATGTTCAAAGACCGCATCCTCGAACTG 3763210
Query 254115 AACGCTTCTGACGAACGCGGGTTGGACGTCGTCCGCGACAAGATCAAGACTTTCTCCAAG 254174
||||| || ||||| || || | | || || ||| ||||||||||| ||||| ||
Sbjct 3763209 AACGCCTCCGACGAGCGGGGCATCAATGTGGTGCGCACCAAGATCAAGAACTTCTCGCAG 3763150
Query 254175 ATGTCGATTTC----GT-CGTTCCAAC--CCGGC--TGTCCGCCTTTCAAGCTCGTGATC 254225
| ||| | || ||| | | | ||| |||||||| || ||| || | |||
Sbjct 3763149 CTCTCGGCTAGCAGTGTGCGTCCGGATGGCAGGCCGTGTCCGCCCTTTAAGATCATCATC 3763090
Query 254226 CTGGACGAGGCGGACACCATGACGGCCGACGCGCAGTCCGCCCTCCGCCGAACGATGGAG 254285
||||||||||| ||| | ||||| | ||| ||||| ||||| || || || ||||||
Sbjct 3763089 CTGGACGAGGCTGACTCGATGACCCATGCCGCCCAGTCAGCCCTGCGTCGCACCATGGAG 3763030
Query 254286 ACGCA-CTCCGTTGTGACGCGTTTTTGCCTGGTGTGCAACTACGTGTCGAAGATCATCGC 254344
| | | ||| | || || || |||||| | || |||||||| || | |||||| |
Sbjct 3763029 AAGGAGAGCCGCAG-CACCCGCTTCTGCCTGATATGTAACTACGTCTCCAGGATCATTGT 3762971
Query 254345 CCCGCTGGCTTCTCGGTGCGCCAAGTTTCGATT 254377
|| | | || || ||| ||||||| || ||
Sbjct 3762970 GCCCATTACCTCGCGCTGCTCCAAGTTCCGCTT 3762938
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1073690416598464
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |