Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04]
5,523 sequences; 169,378,599 total letters
Query= NC_002796.1
Length=40003
Score E
Sequences producing significant alignments: (Bits) Value
seq1936 235 1e-57
>seq1936
Length=1051
Score = 235 bits (260), Expect = 1e-57
Identities = 506/742 (68%), Gaps = 22/742 (3%)
Strand=Plus/Plus
Query 1635 GGGACACTACATGATTTTCAAACTAAAAACCTTAATATGTGGCTTCAGCAAGATGTTGAT 1694
|| ||||| | |||||||||| ||||||||||| ||||||| | ||| ||
Sbjct 133 GGCACACTCAACGATTTTCAAAACAAAAACCTTAACTTGTGGCTAGAACAATCGACCGAC 192
Query 1695 AGTTACTTAAATCTTGCTGATGTTGAAAAAGCTATTATTCCTGAATTTAGCATTCATG-- 1752
|| | ||| || || |||| ||||| ||||||||| | |||||| || |||
Sbjct 193 AGCTTCTTGAAACTGCCTGACGTTGAGCGAGCTATTATATCATCATTTAGTTTTGATGAT 252
Query 1753 -GGCAACGCTGTTATATAGGTATTGACTATTCAATGATGTCAGATAATACAGCGATTGCT 1811
||||| |||||| || |||| || || ||| | ||||| |||||| | ||
Sbjct 253 CGGCAA---GTTTATATTGGCTTTGATTACTCGATGTTTAGTGATAACACAGCGCTAGCG 309
Query 1812 TTCGTTTTTCCTTATTTAGATGATGAAGGAAAGCCTAAGTGGCATGTTGAACAGCATTCG 1871
|| || ||||||||| ||| || | | || || ||| | || | ||||||
Sbjct 310 TTTGTATTTCCTTATCGTGATAATAATGATAAACCACGATGGTTTATTTATCAGCATAGC 369
Query 1872 TTTGTTCCATTCCAAAGAGCAGGTTCAATTGATGCTAAAGAAAAACAAGATGGTATTAAT 1931
||| |||| | || | ||| ||||||||||| ||||||||||| ||||| ||||||||
Sbjct 370 TTTATTCCCTGGCAGAAAGCCGGTTCAATTGAGGCTAAAGAAAAGCAAGACGGTATTAAC 429
Query 1932 TATAGAGAACTAGAAAAATATGGTTTTTGTACAGTCACAAGCCACCAACAAGGGCTAATC 1991
||| | || ||| || | || ||||||||| | | ||||| | ||||| ||||||
Sbjct 430 TATCGGGACTTAGCTCAAAAGGGATTTTGTACAATTAGTAGCCATCCTCAAGGACTAATC 489
Query 1992 AATGATGATGAGGTCTATGAATGGATTGTAAACTATATTGA-AGATAACGCATTGGATGT 2050
||||| || | || ||| | ||| | | |||| | |||| | | || | |||| ||
Sbjct 490 AATGACGAGCAAGTTTATCAGTGGTTACTTAACTTTGTTGAGCGGCATCG-ACTGGAAGT 548
Query 2051 TATCTTTTTTGGTTACGATGCAATGGG--TATC-ACTAAAGTAATTCAAATGCT-CATGA 2106
| | || |||||||| || || ||| || | ||| | | | || ||| ||
Sbjct 549 TGTTTTCTTTGGTTATGACGCGTGGGGGCTAACGCCTACAATCAAGCA---GCTAGATTT 605
Query 2107 ATAATACGGGCTATAATTTACAACCTATCCGTCAAAGAACGAGTGAGTTGAAAGATCCTA 2166
| ||| | || | || ||| | || || || |||| ||||| ||||| ||||| |
Sbjct 606 A-AATTCCGGTTGGCCATTGCAAGCCATTCGGCAGCGAACTAGTGAATTGAAGGATCCAA 664
Query 2167 CAAAATTTTTACAAAAACTATTTGTAGAGGGATCTATTAGTAGGC-TAGATGATAAAATC 2225
| || ||||| || | | ||||| || || || ||| || | |||||| |||
Sbjct 665 CTAAGTTTTTGCAGACGATGTTTGTTGAAGGCTC-GGTAGACCGCTTGGATGATCGAATT 723
Query 2226 ATGGAAAAATCGCTATTAAATGCGG--TTTTACGTGAAGATTCAATAGGAATACAGGTAG 2283
|||||||| | || ||||||| | |||| |||||| ||| || || || || |
Sbjct 724 ATGGAAAAGGCATTACTAAATGCTGAAATTTA--TGAAGACAAAATTGGTATTCAAGTCG 781
Query 2284 ATAAACGAAAAGCAACTTTAAAAATTGACGTTGTTGATGCGATTATTGATGCTTTATTTC 2343
||||| || || || || || ||||| || || |||||| | |||||||| |||||||
Sbjct 782 ATAAAGCTAAGGCCACATTGAAGATTGATGTGGTAGATGCGTTAATTGATGCCTTATTTC 841
Query 2344 AAGGGATGTATCACTTTGAGGA 2365
| | |||||||||||||| ||
Sbjct 842 AGGCTATGTATCACTTTGAAGA 863
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 127879612385590
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |