Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04]
5,523 sequences; 169,378,599 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq5396 320 2e-82
seq5267 125 9e-24
>seq5396
Length=9561034
Score = 320 bits (354), Expect = 2e-82
Identities = 1200/1871 (64%), Gaps = 26/1871 (1%)
Strand=Plus/Plus
Query 62036 CTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCC 62095
||| |||| ||||| ||||||| | || || || || || || |||||||||||
Sbjct 8233758 CTTATCCACGGTGAACTGAATGGCGTTTGCAGCTGGCTTTGTGCGCAGGTAGTACATTCC 8233817
Query 62096 CGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGG 62155
||||| ||||| |||| || || || || ||| ||||| ||| | ||
Sbjct 8233818 AGTTTTGAGACCAGCTTTCCAGGAATAGAAGTGTATGGACGTGAGTTTTCCATAGTTTGG 8233877
Query 62156 ATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGC 62215
||||| | ||| || || | || ||||| ||||| ||||| ||||| | ||||| ||
Sbjct 8233878 CTCTGCCACATGAATGTTGAACGACTGACTCTGATCTATGAACGCTCCTCGATCTGCGGC 8233937
Query 62216 CATTTTTATGATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATAAAC-TCGCTTAATAT 62274
||| || ||| ||| ||| || |||||||| | ||||| || | |||| | |
Sbjct 8233938 CATCTTAATGGTCGACTTCACTGAGATTTCCCACACTGTTTTGTACAGATCGCGGACCTT 8233997
Query 62275 CTTCTGGAAGGTTTG--TATTCTGAATGGATCCACCATCTACCA-TAATCCTATTCTTGA 62331
|| ||| || | ||||||| || || || || || | | || ||||| |
Sbjct 8233998 CTGGGGGATGGCCTCAATATTCTGGATTGAGCC-CCTGCTGGAAATGATTTGGTTCTTCA 8234056
Query 62332 TCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGGTTAACTACTT 62391
| || || | ||| || | ||| |||| | || | | ||| ||||||| ||||
Sbjct 8234057 TGTCGTCGTCCCACAAGTCCAGCTCCGTTAGGTCCCTTAACAAATGATGGTTAACCACTT 8234116
Query 62392 GGAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACT 62451
||||||| ||||||| |||| || || |||||||| | || ||||| || | || |
Sbjct 8234117 GGAATTCGCCAGACAGAACTCGCCTGGTATAAATATTCGTTGTGTACGGCTCGAAAGATT 8234176
Query 62452 CATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTAT 62511
| || || |||| |||||| ||||| || ||||| |||||||| || ||||| | |
Sbjct 8234177 CGTTGTTGCCCATAATTTGGGCAGTGGACGCAGTGGGCATAGGCGCAACCAACAGGGAGT 8234236
Query 62512 TTCTAAGACCGTA-TGTTCTGATTTTATCTTTTAGATGTTCCCAATTCCAAAGATCCGAC 62570
| | | ||||| || | |||| || || || | | ||| | |||||| | | |
Sbjct 8234237 TCCGGACACCGTGCTGCT-TGATGGACTCCTTCAGTTTCTGCCAGTCCCAAAGGTTTGTC 8234295
Query 62571 GGTACAACANNNNNNNNNNNATATTGTAGAATACCGTTACTGGCGTACGATCCTACATAT 62630
|| || || || ||||| || || || || ||| ||||
Sbjct 8234296 GGCACTTTGTCCCACATGTCGTACTGCAGAATGCCTTTGCTCACGGGACTTCCCTCATAG 8234355
Query 62631 GTATCATATGGTCCTTCCTTCTCAGCTAGTTTACAACTCGCCTCTAATGCACCGTAATAA 62690
|| |||||||| || || ||| || |||| |||||| || || | || ||||| ||
Sbjct 8234356 GTTTCATATGGGCCGTCGATCTGGGCCAGTTCACAACTGGCTTCCAGGGCGCCGTAGTAG 8234415
Query 62691 ATGGTTTCAAAGATCTTCTTATTTA-GATCTTGTGCTTCCGGGCTATCAAATGGATAATT 62749
|||||||| || |||| || ||| | || | ||||| || ||| | || ||
Sbjct 8234416 ATGGTTTCGAATATCTGCTGATTCAAGAGACCG-GCTTCTTCACTTTCATAGGGGAAACG 8234474
Query 62750 TAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTT 62809
| ||||| | ||||| || ||||| || ||||| || || | || | ||| |||
Sbjct 8234475 CATAAGAATTAGGGCGTCAGCGAATCCCTGGACACCGATGCCCACGGGACGATGCCTCAA 8234534
Query 62810 ATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATT 62869
|| || | | || ||||| | || || | || ||||| || || || || |||||
Sbjct 8234535 GTTGGATTTCTTTGCCTCTGGCAGGGGGTAGAAGTTTATATCGATGATCTTGTTAAGATT 8234594
Query 62870 TCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCCCATCTA---T 62926
|| || ||| || ||||| ||||| ||||| || | || |
Sbjct 8234595 CTTGGTAACCGTCTTGGTAACTTCCTTAAGTTTCTTGAAATCGTATGTCTTCTCGGGAGT 8234654
Query 62927 TACAAACATGTTCAATGCAACAGATGCCAGATTACACACGGCTACCTCATTAGCATCCGC 62986
|| |||||||| | || | ||||||| || || || || | ||| | | | |
Sbjct 8234655 GACGAACATGTTGAGGGCGATGGATGCCAAGTTGCAGACTGCAATCTCGTCCGGAGAGGA 8234714
Query 62987 ATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATT 63046
|| | | || || ||||| | || || |||||||| || || | ||| || || ||
Sbjct 8234715 GTACTCCACGATTTCTGTGCACAAGTTGCTGCACTTGATGGTGCCGACATTCTGCTGGTT 8234774
Query 63047 ACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGA 63106
||||| |||| || ||||||||| | || ||| | || | |||||||| | ||| |
Sbjct 8234775 GCTCTTCCTGTTGCAGGCATCCTTAAACAGCATGTAGGGGTTTCCAGTTTCGACCTGTGC 8234834
Query 63107 TTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATA-GATTTGTATCTCCTTTCTC 63165
|| ||||| || ||| | | | ||||||| | | | || | | || |||
Sbjct 8234835 CTCAATAATGGCGAACCACAAGGATTGAGCCTTAACCGTTCGGTTGGCACGACC---CTC 8234891
Query 63166 TTTCGTATAGAGT--ATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCTAGG 63223
|| | ||| |||||| |||||| || || ||||| |||| || | | |||
Sbjct 8234892 TTGCTCATACTTCTCATACAACTTTTCGAATTCATCGCCCCACACATCGTGAAGGCCAGG 8234951
Query 63224 ACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAG 63283
|||| || ||||||||| | ||||| ||||| | ||| || || |||||||||||
Sbjct 8234952 GCATTTATGCGGACACATTAGTGACCAATCTCCATTGGCCTCGACGCGCTTCATAAAGAG 8235011
Query 63284 ATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATT 63343
||| || ||||| || || || ||||| | | | || ||||| || || || ||
Sbjct 8235012 ATCGGGTATCCACAGGGCGTAGAACAGATCGCGGGCGCGATTCTCCTCCTTGCCGGTGTT 8235071
Query 63344 CTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCAT 63403
||| ||||| || |||||| | | | || || ||||| || |||| ||| ||||| |
Sbjct 8235072 CTTCTTAAGTTCCAGGAACTCAAAGACGTCCGAGTGCCAGGGCTCCAGGTAAATGGCAAA 8235131
Query 63404 AACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCT 63463
| || || || ||| ||||||||||| | || | || || || | || ||
Sbjct 8235132 GGCACCGGGACGCTTGCCGCCTCCCTGATCGACATAGCGCGCCACATTGTTGAAGACCCT 8235191
Query 63464 CAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGC 63523
|||||| |||| | || || || | || || || ||| | || || || | ||
Sbjct 8235192 CAACATGGGAACCAGGCCATTGGAAGTGCCGTTCGTGCCGCAAATCGAGGTGCCCTTTGC 8235251
Query 63524 ACGAATATTACTAATTGA----TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGC 63579
|| || ||| || || || || || || ||| || ||||| | ||||
Sbjct 8235252 TCGGAT----GCAATGGACGTTAAGTCCAATGCCGCCGGCCGACTTCGAGATCATGGCGC 8235307
Query 63580 ATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAAC 63639
| | | | | | | | ||||| || ||| || | ||||| | | || ||||
Sbjct 8235308 ACTGCTCCACGGACTTAAAAATGCCCTCGATGGAGTCGGCTGTCATGGTCAAGAGGAAAC 8235367
Query 63640 AGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAA 63699
| |||| || | ||| | || | || ||| | || || || || || || |
Sbjct 8235368 AAGACGACAGCTGCGGGCGATTTGTGGCAGCGGCAAAAAGCGTTGGCGACGCATGAGTGA 8235427
Query 63700 ACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAA 63759
| || || || | || || || || || | |||| ||||||||| | ||| |
Sbjct 8235428 AGTATCGCTCCGACAAGAGGTTATAAGTTTCCACGGCTGCATCTATATCCTCTCCATGGA 8235487
Query 63760 TTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTT 63819
|||| | || || ||||| ||||| || || || | ||| | ||||| |||| | |
Sbjct 8235488 TTCCGATCGCCACGCGCATCAACATATGTTGCGGACGCTCAGCGATTTTTCCGTTTCTCT 8235547
Query 63820 TCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTT 63879
||| || ||||| ||| | || || || ||||||||||| || |||||| || |
Sbjct 8235548 TCAGCAGATAGGAACGTTCGAGGGTCTTGAACCCAAAATAGTTATACCCAAAGTCGCGGT 8235607
Query 63880 CGTAAATAATA 63890
|||| || |||
Sbjct 8235608 CGTAGATTATA 8235618
>seq5267
Length=4296760
Score = 125 bits (138), Expect = 9e-24
Identities = 430/668 (64%), Gaps = 3/668 (0%)
Strand=Plus/Plus
Query 33282 ACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAAT 33341
|||||||| ||||| || ||||| || ||||| || || || || || ||||
Sbjct 668446 ACTCCCATGCGCTGGTACTCGCCCACCTTCTTCTCGAAGAAGTTGGTCTTGCCGTCCAGC 668505
Query 33342 GATATATTTTCCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCCCAAT 33401
|| || | |||||||| | || || || | |||||| || || || ||||
Sbjct 668506 GAGATCATCTCCATGAAGTTGAAGGGGTTCTTGGTATTGTAGATCTTGCCAACGCCCAGC 668565
Query 33402 TCAGAAATCAATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATT 33461
|| | || | ||| || |||||||| || || ||| | || ||||||||
Sbjct 668566 TCCACCAGCAGACGATCCGCCACGAATTCGATGTACTGCGACATGAGGTCGCAATTCATG 668625
Query 33462 CCTATGAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACCGCATTT 33521
|| ||||| || || || | || | || || || || || || |||| || ||||
Sbjct 668626 CCGATGAGGTTTACGGGCAAGGCATCGGTGAGGAACTCCTGCTCTATGGCCACAGCATCG 668685
Query 33522 GTTATAATAAATCTAACGGTTTCTTCACTCGGTGGATGTAATAAATGTTTAAACATCAAA 33581
|| || | | | || || ||| | || | || || | |||||||
Sbjct 668686 CGGATGATCTCGATGATGCGCTCGCGCCTGGGTCGCTGCACCAAGTGCTGGAACATCAGC 668745
Query 33582 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGT 33641
|| || ||||||||||| |||||||| | || | ||||| || || || |||
Sbjct 668746 ACGGCAAAGTCGCAGTGCAGGCCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAGGTCAGT 668805
Query 33642 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAG 33701
|| ||||| || || ||||| || ||||| || ||||| ||||| ||| ||||||
Sbjct 668806 CCCGGCATCAGACCGCGCTTCTTCAGCCAGAAAATGGAGGCGAAGCTGCCGCTGAAGAAG 668865
Query 33702 ATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGG-CGC--TGTCATGT 33758
|| || || || || ||||||||||| | | ||| || | || ||| ||
Sbjct 668866 ATGCCCTCGACGGCGGCAAAGGCAATGATGCGCTCCCCGAAGTTGGCCGCCTTGGAGGAG 668925
Query 33759 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 33818
||||| | ||||| || ||||| || ||| ||||| || || ||||| ||
Sbjct 668926 ATCCAGGAAAGGGCCCAGTCCGCCTTGCGCTTCACAGCGGGCATTGTCTCGATGGCGTTG 668985
Query 33819 AAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATT 33878
|| || || | | | ||| | || || ||||||| | ||| |||||
Sbjct 668986 AACAGGTATTCGCGCTGGTGCGGATCCCGGATGTAGGTGTCGATCAGCACACTGTACATC 669045
Query 33879 TCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATC 33938
||||| || | ||| || ||||| ||||| || || ||||| || | |||||| || |||
Sbjct 669046 TCCGAGTGCACGTTCTCCATGGCGATCTGGAAGCCATAGAAGCAGCGAGCCTCCGTGATC 669105
Query 33939 TGCACTTC 33946
||||| ||
Sbjct 669106 TGCACCTC 669113
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629774118967440
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