Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04] 5,523 sequences; 169,378,599 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq5165 208 7e-49 >seq5165 Length=2344106 Score = 208 bits (230), Expect = 7e-49 Identities = 325/465 (70%), Gaps = 6/465 (1%) Strand=Plus/Plus Query 20889 GGAAACGGACGCGGGGTCCTCCGCAGCTGAAGCAGCAGGGGATCAACGTGGTTGTTGTAA 20948 || || || ||||| || | | |||||| | || || || |||||||| || Sbjct 2002004 GGGAAGGGCCGCGGCGTGCGCTCCAGCTGCTCCCTTAGCGGCTCCACGTGGTTCAGATAG 2002063 Query 20949 ACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCCCGGGGTCAGGCCCGTGACGTGAGCG 21008 ||||| | ||| |||| ||||||||||||||| || || |||||||||| || || ||| Sbjct 2002064 ACGTGCGTGTCGCCCATGGTGTGCACAAAGTCGCCGGGCTTCAGGCCCGTCACATGGGCG 2002123 Query 21009 ATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGACCCCGAGGCCCATGTCG 21068 |||| | || || ||||||||| ||||||||| || || || || |||||||||||| Sbjct 2002124 ATCATGTGGGTGAGCAGGGCGTAGGAGGCGATGTTGAAGGGCACGCCCAGGCCCATGTCG 2002183 Query 21069 GCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAGCC------ACGTAAAACTGA 21122 ||| ||| ||||||||||||||||| ||||| || || ||| || || ||||| Sbjct 2002184 GCGCTCCTTTGGTACAGCTGGCAGGAGAGCTCACCGCGCGCCTGCGAGACATAGAACTGG 2002243 Query 21123 CACAAAACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGGGGTTCCACGCGCAC 21182 || ||| || || || || |||||| | | ||| ||| ||||| || || Sbjct 2002244 GCCAGGCAGTGGCACGGCGGAAGGGCCATCTTTGGTATGTCGAGGGGATTCCAGGCCGAC 2002303 Query 21183 ATAACGATGCGCCGATCGTGGGGCCGCCTGTTAATTAGATCCACCACGTAACGCAGCTGG 21242 || | |||||||| || ||| | | || || || | ||| | |||| |||| Sbjct 2002304 ATGATGATGCGCCTGTCCGAGGGATTCTTCTTGATCGTGTCGATCACCTGGCGCAACTGG 2002363 Query 21243 TCCACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCCCTGTACTCCGCCCCAAAATGTCTC 21302 || | |||| || ||| | | ||||| | |||||| |||||||| || | | Sbjct 2002364 TCGATGCCCTTGCCGCTGTAATCGTCGTCGCAGGTGCCGTACTCGGCCCCAAAGTGACGC 2002423 Query 21303 CACTGGAACCCGTACACCGGCCCCAGATCGCCCTCGCGGCGGTCC 21347 |||||||| ||||| ||||| ||||| ||||| || ||| ||| Sbjct 2002424 CACTGGAAGCCGTAAACCGGGCCCAGGTCGCCGACGGCGCGCTCC 2002468 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427747205729040