Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04]
5,523 sequences; 169,378,599 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq5396 123 2e-23
seq5402 105 7e-18
seq5238 104 2e-17
>seq5396
Length=9561034
Score = 123 bits (136), Expect = 2e-23
Identities = 469/729 (64%), Gaps = 19/729 (3%)
Strand=Plus/Plus
Query 153625 TGTTGACGGCAATCGACGCCAAGTTGCAAACGGCAGTTTCGTCGGGGGCGCAATATTGTA 153684
|||||| ||| || || ||||||||||| || ||| | ||||| || | | | || | |
Sbjct 8234663 TGTTGAGGGCGATGGATGCCAAGTTGCAGACTGCAATCTCGTCCGGAGAGGAGTACTCCA 8234722
Query 153685 CTATTTCCGCACACAAATTGCTGCATTTTATCAGGCCGCAATTACTTTGATTGCTTTTGC 153744
| ||||| | ||||| |||||||| || || |||| ||| || ||||| || |
Sbjct 8234723 CGATTTCTGTGCACAAGTTGCTGCACTTGATGGTGCCGACATTCTGCTGGTTGCTCTTCC 8234782
Query 153745 GGTTACAAGCGTCCTTGTATAGCATGTATGGTGTGCCGGTTTCGGCTTGAATTTCTATAA 153804
||| || || ||||| | |||||||| || | || |||||| | || || ||||
Sbjct 8234783 TGTTGCAGGCATCCTTAAACAGCATGTAGGGGTTTCCAGTTTCGACCTGTGCCTCAATAA 8234842
Query 153805 TAGTACGCATCAATG--TGA-CCGCGGGCATTTGATCGCGAAACTGGCCCTTGTCTTCGT 153861
| | | ||| | ||| || | || | | | | | |||| | || |
Sbjct 8234843 TGGCGAACCACAAGGATTGAGCCTTAACCGTTCGGTTGGCA---CGACCCTCTTGCTCAT 8234899
Query 153862 AGTGTTTGTACCAGTATTCAAACTCATCACCAAACGTATTGTTAAGCTCGGGACATTCGT 153921
| | | ||| | | ||| || ||||| || || || || ||| | || |||| |
Sbjct 8234900 ACTTCTCATACAACTTTTCGAATTCATCGCCCCACACATCGTGAAGGCCAGGGCATTTAT 8234959
Query 153922 TGGGACACATCAGTGACCATCGGCCATTTTCTTGAACGCGACGCATAAATATATCGGGAA 153981
|||||||| |||||||| ||||| | | ||||| |||||| | |||||| |
Sbjct 8234960 GCGGACACATTAGTGACCAATCTCCATTGGCCTCGACGCGCTTCATAAAGAGATCGGGTA 8235019
Query 153982 CCCATAGGGCGTTCATCAGGTCGCGCGCTTTCGTGTCTTCGCTGCCAATGTTTCGACGCA 154041
||| ||||||| | ||| ||||| || | || || |||| || ||| | |
Sbjct 8235020 TCCACAGGGCGTAGAACAGATCGCGGGCGCGATTCTCCTCCTTGCCGGTG-TTCTTCTTA 8235078
Query 154042 TG-TGTAAGACGTCCATTATGTCGCAATGCCACGGTTCCACGTAAACTGCTTGAGCGCCT 154100
| | | || || | | ||| | ||||| || |||| ||||| || || ||
Sbjct 8235079 AGTTCCAGGAACTCAAAGACGTCCGAGTGCCAGGGCTCCAGGTAAATGGCAAAGGCACCG 8235138
Query 154101 TTACGCTTGCCG---CCCTGATTTACGTGACGCACCATATTGTTGAAAACCCGAAGCATG 154157
|||||||||| ||||||| || | ||| ||| ||||||||| |||| | ||||
Sbjct 8235139 GGACGCTTGCCGCCTCCCTGATCGACATAGCGCGCCACATTGTTGAAGACCCTCAACATG 8235198
Query 154158 GGTAGCAGACCGCTGGCGGTACCGTTTGTAGATTTAATCTTGCTG----TTGCGGCCTCG 154213
|| | ||| || ||| || ||||| || |||| | || ||| ||||
Sbjct 8235199 GGAACCAGGCCATTGGAAGTGCCGTTCGTGCCGCAAATCGAGGTGCCCTTTG----CTCG 8235254
Query 154214 AACGCTGTTTACGTTTAATCCAATACCGCCGCCGTGTTTGGAGATCATGGCGCAATCGTT 154273
| || | ||||| | |||||| |||||| | || |||||||||||||| | |
Sbjct 8235255 GATGCAATGGACGTTAAGTCCAATGCCGCCGGCCGACTTCGAGATCATGGCGCACTGCTC 8235314
Query 154274 CAATGTGTTATAGATACCACGAATGCTATCGCTTTCCATGGTCAATAGGAAACATGAACT 154333
|| | ||| | || || ||| ||| | ||||||||| |||||||| ||
Sbjct 8235315 CACGGACTTAAAAATGCCCTCGATGGAGTCGGCTGTCATGGTCAAGAGGAAACAAGACGA 8235374
Query 154334 CATCTGCGG 154342
|| ||||||
Sbjct 8235375 CAGCTGCGG 8235383
Score = 109 bits (120), Expect = 5e-19
Identities = 169/238 (71%), Gaps = 4/238 (2%)
Strand=Plus/Minus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| || || | ||||| || ||||| | || ||||| || ||||||||||| ||
Sbjct 8331077 CCACCACGCAGACGCAGCACCAAGTGCAAAGTGGACTCCTTCTGAATGTTATAGTCAGAG 8331018
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| |||| ||||| ||||| || ||||| |||||||||| |||||||| |||||
Sbjct 8331017 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGGA 8330958
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716
|| ||||||||||| ||| | || | ||| | | ||| | || || | || || ||
Sbjct 8330957 ATTCCTTCTTTGTC-CTGAATCTTGGCTTTGACATTTTCGATAGTATCCGAAGGTTCGAC 8330899
Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATAGCTTATGTT 139774
||||| || | |||||||| || | || || ||||| || ||||| ||| ||||
Sbjct 8330898 CTCAAGCGTGATGGTCTTGCCCGTGAGGGTCTTAACGAAGATCTGCAT--CTTGTGTT 8330843
>seq5402
Length=10656099
Score = 105 bits (116), Expect = 7e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| ||||| | ||| | ||| || || | || ||||| || || ||||| |||||
Sbjct 571411 CCACCTCGCAGACGGAGAACCAAATGCAAGGTCGACTCCTTCTGGATGTTGTAATCAGAA 571470
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| |||| ||| |||||||| || || || |||||||||| |||||||| || ||
Sbjct 571471 AGAGTGCGTCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGA 571530
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717
|| || || ||||| ||| || || | | || | ||||| | |||||||||
Sbjct 571531 ATTCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCAGATGGCTCCACC 571590
Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
|| | ||| | |||||||||||||| || || || || || ||||||
Sbjct 571591 TCCAGGGTGATGGTCTTGCCGGTCAAAGTCTTGACAAAGATCTGCATA 571638
Score = 98.7 bits (108), Expect = 1e-15
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| || || | ||| | || ||||||| || ||||| || || ||||| || ||| |
Sbjct 571639 CCACCGCGCAGACGGAGGACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 571698
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| || | ||| || || || || || || |||||||||| |||||||| || ||
Sbjct 571699 AGGGTACGTCCGTCCTCCAGTTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGG 571758
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717
||||| || ||||| ||| || || | | || | ||||||| ||||||||||
Sbjct 571759 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATCGTGTCGGAGGGCTCCACC 571818
Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
|| | ||| | ||||| || ||||| || || || || || |||||
Sbjct 571819 TCCAAGGTAATGGTCTTACCAGTCAAGGTCTTCACAAAGATCTGCAT 571865
>seq5238
Length=3592495
Score = 104 bits (114), Expect = 2e-17
Identities = 141/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627
|| ||||| || || ||||| || ||| || |||| ||| || ||||| || ||
Sbjct 2679430 GTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCCTCCAGCTGCTTGCCG 2679371
Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687
|| |||||||||| |||||||| || || ||||| || ||||| ||| || ||
Sbjct 2679370 GCGAAGATCAGACGCTGCTGATCTGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTC 2679311
Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747
| | || | ||||| | ||||||||||| | ||| | ||||||||||| | |||
Sbjct 2679310 ACATTCTCGATGGTGTCCGAAGGCTCCACCTCCAAGGTGATGGTCTTGCCGGTGAGGGTT 2679251
Query 139748 TTTACGAATATTTGCAT 139764
|| ||||| ||||||||
Sbjct 2679250 TTCACGAAGATTTGCAT 2679234
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496029752981600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |