Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04] 5,523 sequences; 169,378,599 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq5396 389 6e-103 seq5267 132 7e-26 >seq5396 Length=9561034 Score = 389 bits (430), Expect = 6e-103 Identities = 1224/1882 (65%), Gaps = 32/1882 (2%) Strand=Plus/Plus Query 78708 CTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCC 78767 ||| |||| ||||| ||||||| | || || || || || || ||||||||||| Sbjct 8233758 CTTATCCACGGTGAACTGAATGGCGTTTGCAGCTGGCTTTGTGCGCAGGTAGTACATTCC 8233817 Query 78768 CGTTTTTAGACCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGG 78827 ||||| ||||| |||| ||||| || || ||| ||||| ||| | || Sbjct 8233818 AGTTTTGAGACCAGCTTTCCAGGAATAGAAGTGTATGGACGTGAGTTTTCCATAGTTTGG 8233877 Query 78828 ATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGC 78887 ||||| | ||| || || | || ||||| ||||| ||||| ||||| | ||||| || Sbjct 8233878 CTCTGCCACATGAATGTTGAACGACTGACTCTGATCTATGAACGCTCCTCGATCTGCGGC 8233937 Query 78888 CATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAAC-TCGCTTAATAT 78946 ||| || ||| ||| ||| || |||||||| | ||||| || | |||| | | Sbjct 8233938 CATCTTAATGGTCGACTTCACTGAGATTTCCCACACTGTTTTGTACAGATCGCGGACCTT 8233997 Query 78947 CTTCTGGAAGGTTTG--TATTCTGAATGGATCCACCATCTGCCA-TAATCCTATTCTTGA 79003 || ||| || | ||||||| || || || || ||| | | || ||||| | Sbjct 8233998 CTGGGGGATGGCCTCAATATTCTGGATTGAGCC-CCTGCTGGAAATGATTTGGTTCTTCA 8234056 Query 79004 TCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTT 79063 | || || | ||| || | ||| |||| | || | | ||| | ||||| |||| Sbjct 8234057 TGTCGTCGTCCCACAAGTCCAGCTCCGTTAGGTCCCTTAACAAATGATGGTTAACCACTT 8234116 Query 79064 GAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATT 79123 | ||||| ||||||| |||| || || |||||||| | || || || || | |||| Sbjct 8234117 GGAATTCGCCAGACAGAACTCGCCTGGTATAAATATTCGTTGTGTACGGCTCGAAAGATT 8234176 Query 79124 CATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTAT 79183 | || || |||| |||||| ||||| || || || |||||||| || ||||| | | Sbjct 8234177 CGTTGTTGCCCATAATTTGGGCAGTGGACGCAGTGGGCATAGGCGCAACCAACAGGGAGT 8234236 Query 79184 TTCTAAGACCGTA-TGATCTGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGAC 79242 | | | ||||| || | |||| || || || | ||| |||||||| | | | Sbjct 8234237 TCCGGACACCGTGCTGCT-TGATGGACTCCTTCAGTTTCTGCCAGTCCCAAAGGTTTGTC 8234295 Query 79243 GGGACAACATTCCAAAGATCATATTGTAGAATACCGTTACTAGCGTATGATCCTGTGTAT 79302 || || | ||| | || || || ||||| || || || || ||| || Sbjct 8234296 GGCACTTTGTCCCACATGTCGTACTGCAGAATGCCTTTGCTCACGGGACTTCCCTCATAG 8234355 Query 79303 GTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAATAA 79362 |||||||| || || || | | ||| | ||||||||| || || | || ||||| || Sbjct 8234356 GTTTCATATGGGCCGTCGATCTGGGCCAGTTCACAACTGGCTTCCAGGGCGCCGTAGTAG 8234415 Query 79363 ATGGTTTCGAAAATCTTCTTATT---GAGATCTTGTGCTTCTAGGCTATCAAATGGATAA 79419 ||||||||||| |||| || ||| |||| | |||||| || ||| | || || Sbjct 8234416 ATGGTTTCGAATATCTGCTGATTCAAGAGACCG---GCTTCTTCACTTTCATAGGGGAAA 8234472 Query 79420 TTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTC 79479 | ||||| | ||||| || ||||| || ||||| || || | || | ||| ||| Sbjct 8234473 CGCATAAGAATTAGGGCGTCAGCGAATCCCTGGACACCGATGCCCACGGGACGATGCCTC 8234532 Query 79480 TTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGA 79539 || || | | || ||||| | || || | || ||||| || || || || ||| Sbjct 8234533 AAGTTGGATTTCTTTGCCTCTGGCAGGGGGTAGAAGTTTATATCGATGATCTTGTTAAGA 8234592 Query 79540 TTCCTGACTATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCGTCCATCTA-- 79597 ||| || | ||| || ||||| ||||| ||||| || ||| ||| Sbjct 8234593 TTCTTGGTAACCGTCTTGGTAACTTCCTTAAGTTTCTTGAAATCGTAT-GTCT-TCTCGG 8234650 Query 79598 ---TTACAAACATGTTCAACGCGACAGATGCCAGATTACAAACGGCTACCTCATTAGCAT 79654 | || |||||||| | |||| ||||||| || || || || | ||| | | | Sbjct 8234651 GAGTGACGAACATGTTGAGGGCGATGGATGCCAAGTTGCAGACTGCAATCTCGTCCGGAG 8234710 Query 79655 CCGCATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTT 79714 | || | | ||||| ||||| | ||| || ||||| ||||| || | ||| || | Sbjct 8234711 AGGAGTACTCCACGATTTCTGTGCACAAGTTGCTGCACTTGATGGTGCCGACATTCTGCT 8234770 Query 79715 GATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCT 79774 | || ||||| |||| || ||||||||| | || ||| | || | |||||||| | || Sbjct 8234771 GGTTGCTCTTCCTGTTGCAGGCATCCTTAAACAGCATGTAGGGGTTTCCAGTTTCGACCT 8234830 Query 79775 GAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGACTTGTATCTCTTTT 79834 | | || ||||| || ||| | | | ||||||| | | ||| | | Sbjct 8234831 GTGCCTCAATAATGGCGAACCACAAGGATTGAGCCTTAACCGTTCGGTTGG--CACGACC 8234888 Query 79835 CTCTT--TCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCC 79892 ||||| || || | ||| || |||||| || || ||||| ||||||| | || Sbjct 8234889 CTCTTGCTCATACTTCTCATACAACTTTTCGAATTCATCGCCCCACACATCGTGAAGGCC 8234948 Query 79893 AGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAA 79952 ||| |||| | |||||||| | ||||| ||||||| ||| || || |||||||| Sbjct 8234949 AGGGCATTTATGCGGACACATTAGTGACCAATCTCCATTGGCCTCGACGCGCTTCATAAA 8235008 Query 79953 GAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGT 80012 |||||| || ||||| || || || ||||| | || | || |||||| || || || Sbjct 8235009 GAGATCGGGTATCCACAGGGCGTAGAACAGATCGCGGGCGCGATTCTCCTCCTTGCCGGT 8235068 Query 80013 ATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGC 80072 ||||| ||||| || |||||| | | | || || ||||| || |||| ||| ||||| Sbjct 8235069 GTTCTTCTTAAGTTCCAGGAACTCAAAGACGTCCGAGTGCCAGGGCTCCAGGTAAATGGC 8235128 Query 80073 CATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAAC 80132 | | || || || ||| ||||||||||| | || | || || || | || Sbjct 8235129 AAAGGCACCGGGACGCTTGCCGCCTCCCTGATCGACATAGCGCGCCACATTGTTGAAGAC 8235188 Query 80133 TCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACT 80192 |||||||| |||| | |||||||| || || || || ||| | || || | || | Sbjct 8235189 CCTCAACATGGGAACCAGGCCATTGGAAGTGCCGTTCGTGCCGCAAATCGAGGTGCCCTT 8235248 Query 80193 GGCACGAATATTACTAATTGA----TAGACCTATTCCCCCTGCCATTTTAGAGATTAATG 80248 || || || ||| || || || || || || ||| || ||||| | | Sbjct 8235249 TGCTCGGAT----GCAATGGACGTTAAGTCCAATGCCGCCGGCCGACTTCGAGATCATGG 8235304 Query 80249 CGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAA 80308 |||| | | | | | | | |||||||| ||| || | ||||| | | || | Sbjct 8235305 CGCACTGCTCCACGGACTTAAAAATGCCCTCGATGGAGTCGGCTGTCATGGTCAAGAGGA 8235364 Query 80309 AACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCG 80368 |||| |||| || | ||| | || | || ||| | || || || || || | Sbjct 8235365 AACAAGACGACAGCTGCGGGCGATTTGTGGCAGCGGCAAAAAGCGTTGGCGACGCATGAG 8235424 Query 80369 TAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGAT 80428 | || || || |||| || || || || || | |||| ||||||||| | || Sbjct 8235425 TGAAGTATCGCTCCGACAAGAGGTTATAAGTTTCCACGGCTGCATCTATATCCTCTCCAT 8235484 Query 80429 GAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTA 80488 | ||||| | ||| || ||||| ||||| || || || | ||| |||| || ||| Sbjct 8235485 GGATTCCGATCGCCACGCGCATCAACATATGTTGCGGACGCTCAGCGATTTTTCCGTTTC 8235544 Query 80489 TTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTC 80548 | |||| || || || ||| | || || || ||||||||||| || |||||| | Sbjct 8235545 TCTTCAGCAGATAGGAACGTTCGAGGGTCTTGAACCCAAAATAGTTATACCCAAAGTCGC 8235604 Query 80549 GTTCGTAAATAATAACCGAGTT 80570 | ||||| || ||| ||||| Sbjct 8235605 GGTCGTAGATTATAGAAGAGTT 8235626 >seq5267 Length=4296760 Score = 132 bits (146), Expect = 7e-26 Identities = 434/670 (65%), Gaps = 7/670 (1%) Strand=Plus/Plus Query 49660 ACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAAT 49719 |||||||| ||||| || ||||| || ||||| || || || || || |||| Sbjct 668446 ACTCCCATGCGCTGGTACTCGCCCACCTTCTTCTCGAAGAAGTTGGTCTTGCCGTCCAGC 668505 Query 49720 GATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAAT 49779 || || | |||||||| | || || || | ||| || || || || |||| Sbjct 668506 GAGATCATCTCCATGAAGTTGAAGGGGTTCTTGGTATTGTAGATCTTGCCAACGCCCAGC 668565 Query 49780 TCAGAAATCAATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATT 49839 || | || | |||||| || ||||| || || ||| | || |||||||| Sbjct 668566 TCCACCAGCAGACGATCCGCCACGAATTCGATGTACTGCGACATGAGGTCGCAATTCATG 668625 Query 49840 CCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCT 49899 || || || || || || | || | || || || || || || |||| || ||||| Sbjct 668626 CCGATGAGGTTTACGGGCAAGGCATCGGTGAGGAACTCCTGCTCTATGGCCACAGCATCG 668685 Query 49900 GTTATAATAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAA 49959 || || | | | || || ||| | |||| || || | ||||||| Sbjct 668686 CGGATGATCTCGATGATGCGCTCGCGCCTGGGTCGCTGCACCAAGTGCTGGAACATCAGC 668745 Query 49960 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 50019 || || ||||||||||| |||||||| | || || |||||||| || || ||| Sbjct 668746 ACGGCAAAGTCGCAGTGCAGGCCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAGGTCAGT 668805 Query 50020 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAA--TGACCCAGAAAAGA 50077 || ||||| || || ||||| || ||||| || ||||| || || || | | | |||| Sbjct 668806 CCCGGCATCAGACCGCGCTTCTTCAGCCAGAAAATGGAGGCGAAGCTGCCGCTG--AAGA 668863 Query 50078 AGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG-CGC--TGTCAT 50134 |||| || || || ||||||||||||| | | ||| || | ||| ||| || Sbjct 668864 AGATGCCCTCGACGGCGGCAAAGGCAATGATGCGCTCCCCGAAGTTGGCCGCCTTGGAGG 668923 Query 50135 GTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCAT 50194 ||||| | ||||| || ||||| || ||| ||||| || || ||||| | Sbjct 668924 AGATCCAGGAAAGGGCCCAGTCCGCCTTGCGCTTCACAGCGGGCATTGTCTCGATGGCGT 668983 Query 50195 TAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACA 50254 | || || || | | | ||| | || || ||||||| | ||| |||| Sbjct 668984 TGAACAGGTATTCGCGCTGGTGCGGATCCCGGATGTAGGTGTCGATCAGCACACTGTACA 669043 Query 50255 TTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAA 50314 | ||||| || | ||| || ||||| ||||| || || ||||| || | |||||| || | Sbjct 669044 TCTCCGAGTGCACGTTCTCCATGGCGATCTGGAAGCCATAGAAGCAGCGAGCCTCCGTGA 669103 Query 50315 TCTGCACTTC 50324 ||||||| || Sbjct 669104 TCTGCACCTC 669113 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718219212517720