Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04] 5,523 sequences; 169,378,599 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq5396 333 4e-86 >seq5396 Length=9561034 Score = 333 bits (368), Expect = 4e-86 Identities = 1203/1873 (64%), Gaps = 30/1873 (2%) Strand=Plus/Plus Query 70791 CTTGTCCAATGTAAACTGAATGGGAGAGGATGC-GGCTTTCGTACGTAGATAGTACATGC 70849 ||| |||| || |||||||||| | || |||||| || || || |||||||| | Sbjct 8233758 CTTATCCACGGTGAACTGAATGGCGTTTGCAGCTGGCTTT-GTGCGCAGGTAGTACATTC 8233816 Query 70850 CTGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCTAG 70909 | ||||| ||||| |||| || || || || ||| ||||| |||| | | Sbjct 8233817 CAGTTTTGAGACCAGCTTTCCAGGAATAGAAGTGTATGGACGTGAGTTTTCCATAGTTTG 8233876 Query 70910 GATCGGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAG 70969 | || || | ||||| || | ||||||||| ||||| ||||| ||||| | ||||| | Sbjct 8233877 GCTCTGCCACATGAATGTTGAACGACTGACTCTGATCTATGAACGCTCCTCGATCTGCGG 8233936 Query 70970 CCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAAC-TCGCTTAATA 71028 |||| || ||| ||| ||| || |||||||| | ||||| || | |||| | Sbjct 8233937 CCATCTTAATGGTCGACTTCACTGAGATTTCCCACACTGTTTTGTACAGATCGCGGACCT 8233996 Query 71029 TCTTCTGGAAGGTTTG--TATTCTGAATGGATCCACCATCTGCAA-TAATCCTATTTTTG 71085 ||| ||| || | ||||||| || || || || ||| || | || || || Sbjct 8233997 TCTGGGGGATGGCCTCAATATTCTGGATTGAGCC-CCTGCTGGAAATGATTTGGTTCTTC 8234055 Query 71086 ATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACTACT 71145 || || || | ||| || | ||| |||| | || | | |||| | ||||| ||| Sbjct 8234056 ATGTCGTCGTCCCACAAGTCCAGCTCCGTTAGGTCCCTTAACAAATGATGGTTAACCACT 8234115 Query 71146 TGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTGAC 71205 || ||||| ||||||| |||| | || |||||||| | || ||||| || | || Sbjct 8234116 TGGAATTCGCCAGACAGAACTCGCCTGGTATAAATATTCGTTGTGTACGGCTCGAAAGAT 8234175 Query 71206 TCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGACTA 71265 || || || |||| |||||| ||||| || ||||| |||||||| || ||||| || Sbjct 8234176 TCGTTGTTGCCCATAATTTGGGCAGTGGACGCAGTGGGCATAGGCGCAACCAACAGGGAG 8234235 Query 71266 TTTCTAAGACCATG-TGATCGGATTTTATCTTTTAGAGATTCCCAATTCCAAAGATCCGA 71324 || | | ||| || || | | || || || || | ||| | |||||| | | Sbjct 8234236 TTCCGGACACCGTGCTGCTTG-ATGGACTCCTTCAGTTTCTGCCAGTCCCAAAGGTTTGT 8234294 Query 71325 TGGTACAACNNNNNNNNNNNNNNNNNNNNNNATGCCGTTACTAGCGTATGATCCTGCATA 71384 || || ||||| || || || ||| |||| Sbjct 8234295 CGGCACTTTGTCCCACATGTCGTACTGCAGAATGCCTTTGCTCACGGGACTTCCCTCATA 8234354 Query 71385 TGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATGCTCCATAATA 71444 || || ||||| || || | | ||| ||||||||||| || || | || || || || Sbjct 8234355 GGTTTCATATGGGCCGTCGATCTGGGCCAGTTCACAACTGGCTTCCAGGGCGCCGTAGTA 8234414 Query 71445 AATGGTTTCGAAAATCTTCTTATT---GAGATCTTGTGCTTCCGGGCTATCAAATGGATA 71501 ||||||||||| |||| || ||| |||| | | |||| || ||| | || | Sbjct 8234415 GATGGTTTCGAATATCTGCTGATTCAAGAGACCGGCTTCTTCA---CTTTCATAGGGGAA 8234471 Query 71502 ATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGTCT 71561 | | ||||| | ||||| || ||||| || || || || || | || | || || Sbjct 8234472 ACGCATAAGAATTAGGGCGTCAGCGAATCCCTGGACACCGATGCCCACGGGACGATGCCT 8234531 Query 71562 CTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAG 71621 | || || | | || ||||| | || || | || ||||| || || || || || Sbjct 8234532 CAAGTTGGATTTCTTTGCCTCTGGCAGGGGGTAGAAGTTTATATCGATGATCTTGTTAAG 8234591 Query 71622 ATTTCTGACTATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCTCCCATCTA- 71680 ||| || | ||| || ||||| ||||| ||||| || || || Sbjct 8234592 ATTCTTGGTAACCGTCTTGGTAACTTCCTTAAGTTTCTTGAAATCGTATGTCTTCTCGGG 8234651 Query 71681 --TTACAAACACGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATC 71738 | || |||| ||| | ||| | ||||||| || || || || | ||| | | | Sbjct 8234652 AGTGACGAACATGTTGAGGGCGATGGATGCCAAGTTGCAGACTGCAATCTCGTCCGGAGA 8234711 Query 71739 GGCATATTGTATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTG 71798 || || | | ||||| ||||| | || || ||||||||||| || | ||| || || Sbjct 8234712 GGAGTACTCCACGATTTCTGTGCACAAGTTGCTGCACTTGATGGTGCCGACATTCTGCTG 8234771 Query 71799 ATTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTG 71858 || ||||| |||| || ||||||||| | || || | || | |||||||| | ||| Sbjct 8234772 GTTGCTCTTCCTGTTGCAGGCATCCTTAAACAGCATGTAGGGGTTTCCAGTTTCGACCTG 8234831 Query 71859 AGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATATTCTTGTATCTCTTTTC 71918 | || ||||| || ||| | | | ||||||| | | ||| | | | Sbjct 8234832 TGCCTCAATAATGGCGAACCACAAGGATTGAGCCTTAACCGTTCGGTTGG--CACGACCC 8234889 Query 71919 TCTT--TCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAATCCA 71976 |||| || || | ||| || |||||| || || ||||| ||| || | ||| Sbjct 8234890 TCTTGCTCATACTTCTCATACAACTTTTCGAATTCATCGCCCCACACATCGTGAAGGCCA 8234949 Query 71977 GGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAG 72036 || |||| || ||||||||| | |||||| ||||||| | | || || ||||||||| Sbjct 8234950 GGGCATTTATGCGGACACATTAGTGACCAATCTCCATTGGCCTCGACGCGCTTCATAAAG 8235009 Query 72037 AGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTA 72096 ||||| || ||||| || || || ||||| | || | || |||||| || || || Sbjct 8235010 AGATCGGGTATCCACAGGGCGTAGAACAGATCGCGGGCGCGATTCTCCTCCTTGCCGGTG 8235069 Query 72097 TTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCC 72156 ||||| ||||| || |||||| | | | || || ||||| || |||| ||| ||||| Sbjct 8235070 TTCTTCTTAAGTTCCAGGAACTCAAAGACGTCCGAGTGCCAGGGCTCCAGGTAAATGGCA 8235129 Query 72157 ATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACT 72216 | | || || || ||| ||||||||||| | || | || || || | || Sbjct 8235130 AAGGCACCGGGACGCTTGCCGCCTCCCTGATCGACATAGCGCGCCACATTGTTGAAGACC 8235189 Query 72217 CTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTG 72276 |||||||| |||| | |||||||| | || || || ||| | || || | || | Sbjct 8235190 CTCAACATGGGAACCAGGCCATTGGAAGTGCCGTTCGTGCCGCAAATCGAGGTGCCCTTT 8235249 Query 72277 GCACGAATATTGCTAATTGA----TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGC 72332 || || | ||| ||| || || || || || || ||| || ||||| | || Sbjct 8235250 GCTCGGA---TGC-AATGGACGTTAAGTCCAATGCCGCCGGCCGACTTCGAGATCATGGC 8235305 Query 72333 GCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAA 72392 ||| | | | | | | | |||||||| || || | ||||| | | || || Sbjct 8235306 GCACTGCTCCACGGACTTAAAAATGCCCTCGATGGAGTCGGCTGTCATGGTCAAGAGGAA 8235365 Query 72393 ACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGT 72452 ||| |||| || | ||| | || | || ||| | || || || || || || Sbjct 8235366 ACAAGACGACAGCTGCGGGCGATTTGTGGCAGCGGCAAAAAGCGTTGGCGACGCATGAGT 8235425 Query 72453 AAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATG 72512 || || || |||| || || || || || | |||| ||||||||| | ||| Sbjct 8235426 GAAGTATCGCTCCGACAAGAGGTTATAAGTTTCCACGGCTGCATCTATATCCTCTCCATG 8235485 Query 72513 TATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTAT 72572 ||||| | ||| || ||||| |||||||| || || | ||| |||| || ||| | Sbjct 8235486 GATTCCGATCGCCACGCGCATCAACATATGTTGCGGACGCTCAGCGATTTTTCCGTTTCT 8235545 Query 72573 TTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCG 72632 |||| || ||||| ||| | || || || ||||||||||| || |||||| || Sbjct 8235546 CTTCAGCAGATAGGAACGTTCGAGGGTCTTGAACCCAAAATAGTTATACCCAAAGTCGCG 8235605 Query 72633 TTCGTAAATAATA 72645 ||||| || ||| Sbjct 8235606 GTCGTAGATTATA 8235618 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671092866227480