Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04]
5,523 sequences; 169,378,599 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq5396 333 4e-86
>seq5396
Length=9561034
Score = 333 bits (368), Expect = 4e-86
Identities = 1203/1873 (64%), Gaps = 30/1873 (2%)
Strand=Plus/Plus
Query 70791 CTTGTCCAATGTAAACTGAATGGGAGAGGATGC-GGCTTTCGTACGTAGATAGTACATGC 70849
||| |||| || |||||||||| | || |||||| || || || |||||||| |
Sbjct 8233758 CTTATCCACGGTGAACTGAATGGCGTTTGCAGCTGGCTTT-GTGCGCAGGTAGTACATTC 8233816
Query 70850 CTGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCTAG 70909
| ||||| ||||| |||| || || || || ||| ||||| |||| | |
Sbjct 8233817 CAGTTTTGAGACCAGCTTTCCAGGAATAGAAGTGTATGGACGTGAGTTTTCCATAGTTTG 8233876
Query 70910 GATCGGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAG 70969
| || || | ||||| || | ||||||||| ||||| ||||| ||||| | ||||| |
Sbjct 8233877 GCTCTGCCACATGAATGTTGAACGACTGACTCTGATCTATGAACGCTCCTCGATCTGCGG 8233936
Query 70970 CCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAAC-TCGCTTAATA 71028
|||| || ||| ||| ||| || |||||||| | ||||| || | |||| |
Sbjct 8233937 CCATCTTAATGGTCGACTTCACTGAGATTTCCCACACTGTTTTGTACAGATCGCGGACCT 8233996
Query 71029 TCTTCTGGAAGGTTTG--TATTCTGAATGGATCCACCATCTGCAA-TAATCCTATTTTTG 71085
||| ||| || | ||||||| || || || || ||| || | || || ||
Sbjct 8233997 TCTGGGGGATGGCCTCAATATTCTGGATTGAGCC-CCTGCTGGAAATGATTTGGTTCTTC 8234055
Query 71086 ATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACTACT 71145
|| || || | ||| || | ||| |||| | || | | |||| | ||||| |||
Sbjct 8234056 ATGTCGTCGTCCCACAAGTCCAGCTCCGTTAGGTCCCTTAACAAATGATGGTTAACCACT 8234115
Query 71146 TGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTGAC 71205
|| ||||| ||||||| |||| | || |||||||| | || ||||| || | ||
Sbjct 8234116 TGGAATTCGCCAGACAGAACTCGCCTGGTATAAATATTCGTTGTGTACGGCTCGAAAGAT 8234175
Query 71206 TCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGACTA 71265
|| || || |||| |||||| ||||| || ||||| |||||||| || ||||| ||
Sbjct 8234176 TCGTTGTTGCCCATAATTTGGGCAGTGGACGCAGTGGGCATAGGCGCAACCAACAGGGAG 8234235
Query 71266 TTTCTAAGACCATG-TGATCGGATTTTATCTTTTAGAGATTCCCAATTCCAAAGATCCGA 71324
|| | | ||| || || | | || || || || | ||| | |||||| | |
Sbjct 8234236 TTCCGGACACCGTGCTGCTTG-ATGGACTCCTTCAGTTTCTGCCAGTCCCAAAGGTTTGT 8234294
Query 71325 TGGTACAACNNNNNNNNNNNNNNNNNNNNNNATGCCGTTACTAGCGTATGATCCTGCATA 71384
|| || ||||| || || || ||| ||||
Sbjct 8234295 CGGCACTTTGTCCCACATGTCGTACTGCAGAATGCCTTTGCTCACGGGACTTCCCTCATA 8234354
Query 71385 TGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATGCTCCATAATA 71444
|| || ||||| || || | | ||| ||||||||||| || || | || || || ||
Sbjct 8234355 GGTTTCATATGGGCCGTCGATCTGGGCCAGTTCACAACTGGCTTCCAGGGCGCCGTAGTA 8234414
Query 71445 AATGGTTTCGAAAATCTTCTTATT---GAGATCTTGTGCTTCCGGGCTATCAAATGGATA 71501
||||||||||| |||| || ||| |||| | | |||| || ||| | || |
Sbjct 8234415 GATGGTTTCGAATATCTGCTGATTCAAGAGACCGGCTTCTTCA---CTTTCATAGGGGAA 8234471
Query 71502 ATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGTCT 71561
| | ||||| | ||||| || ||||| || || || || || | || | || ||
Sbjct 8234472 ACGCATAAGAATTAGGGCGTCAGCGAATCCCTGGACACCGATGCCCACGGGACGATGCCT 8234531
Query 71562 CTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAG 71621
| || || | | || ||||| | || || | || ||||| || || || || ||
Sbjct 8234532 CAAGTTGGATTTCTTTGCCTCTGGCAGGGGGTAGAAGTTTATATCGATGATCTTGTTAAG 8234591
Query 71622 ATTTCTGACTATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCTCCCATCTA- 71680
||| || | ||| || ||||| ||||| ||||| || || ||
Sbjct 8234592 ATTCTTGGTAACCGTCTTGGTAACTTCCTTAAGTTTCTTGAAATCGTATGTCTTCTCGGG 8234651
Query 71681 --TTACAAACACGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATC 71738
| || |||| ||| | ||| | ||||||| || || || || | ||| | | |
Sbjct 8234652 AGTGACGAACATGTTGAGGGCGATGGATGCCAAGTTGCAGACTGCAATCTCGTCCGGAGA 8234711
Query 71739 GGCATATTGTATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTG 71798
|| || | | ||||| ||||| | || || ||||||||||| || | ||| || ||
Sbjct 8234712 GGAGTACTCCACGATTTCTGTGCACAAGTTGCTGCACTTGATGGTGCCGACATTCTGCTG 8234771
Query 71799 ATTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTG 71858
|| ||||| |||| || ||||||||| | || || | || | |||||||| | |||
Sbjct 8234772 GTTGCTCTTCCTGTTGCAGGCATCCTTAAACAGCATGTAGGGGTTTCCAGTTTCGACCTG 8234831
Query 71859 AGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATATTCTTGTATCTCTTTTC 71918
| || ||||| || ||| | | | ||||||| | | ||| | | |
Sbjct 8234832 TGCCTCAATAATGGCGAACCACAAGGATTGAGCCTTAACCGTTCGGTTGG--CACGACCC 8234889
Query 71919 TCTT--TCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAATCCA 71976
|||| || || | ||| || |||||| || || ||||| ||| || | |||
Sbjct 8234890 TCTTGCTCATACTTCTCATACAACTTTTCGAATTCATCGCCCCACACATCGTGAAGGCCA 8234949
Query 71977 GGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAG 72036
|| |||| || ||||||||| | |||||| ||||||| | | || || |||||||||
Sbjct 8234950 GGGCATTTATGCGGACACATTAGTGACCAATCTCCATTGGCCTCGACGCGCTTCATAAAG 8235009
Query 72037 AGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTA 72096
||||| || ||||| || || || ||||| | || | || |||||| || || ||
Sbjct 8235010 AGATCGGGTATCCACAGGGCGTAGAACAGATCGCGGGCGCGATTCTCCTCCTTGCCGGTG 8235069
Query 72097 TTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCC 72156
||||| ||||| || |||||| | | | || || ||||| || |||| ||| |||||
Sbjct 8235070 TTCTTCTTAAGTTCCAGGAACTCAAAGACGTCCGAGTGCCAGGGCTCCAGGTAAATGGCA 8235129
Query 72157 ATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACT 72216
| | || || || ||| ||||||||||| | || | || || || | ||
Sbjct 8235130 AAGGCACCGGGACGCTTGCCGCCTCCCTGATCGACATAGCGCGCCACATTGTTGAAGACC 8235189
Query 72217 CTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTG 72276
|||||||| |||| | |||||||| | || || || ||| | || || | || |
Sbjct 8235190 CTCAACATGGGAACCAGGCCATTGGAAGTGCCGTTCGTGCCGCAAATCGAGGTGCCCTTT 8235249
Query 72277 GCACGAATATTGCTAATTGA----TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGC 72332
|| || | ||| ||| || || || || || || ||| || ||||| | ||
Sbjct 8235250 GCTCGGA---TGC-AATGGACGTTAAGTCCAATGCCGCCGGCCGACTTCGAGATCATGGC 8235305
Query 72333 GCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAA 72392
||| | | | | | | | |||||||| || || | ||||| | | || ||
Sbjct 8235306 GCACTGCTCCACGGACTTAAAAATGCCCTCGATGGAGTCGGCTGTCATGGTCAAGAGGAA 8235365
Query 72393 ACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGT 72452
||| |||| || | ||| | || | || ||| | || || || || || ||
Sbjct 8235366 ACAAGACGACAGCTGCGGGCGATTTGTGGCAGCGGCAAAAAGCGTTGGCGACGCATGAGT 8235425
Query 72453 AAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATG 72512
|| || || |||| || || || || || | |||| ||||||||| | |||
Sbjct 8235426 GAAGTATCGCTCCGACAAGAGGTTATAAGTTTCCACGGCTGCATCTATATCCTCTCCATG 8235485
Query 72513 TATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTAT 72572
||||| | ||| || ||||| |||||||| || || | ||| |||| || ||| |
Sbjct 8235486 GATTCCGATCGCCACGCGCATCAACATATGTTGCGGACGCTCAGCGATTTTTCCGTTTCT 8235545
Query 72573 TTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCG 72632
|||| || ||||| ||| | || || || ||||||||||| || |||||| ||
Sbjct 8235546 CTTCAGCAGATAGGAACGTTCGAGGGTCTTGAACCCAAAATAGTTATACCCAAAGTCGCG 8235605
Query 72633 TTCGTAAATAATA 72645
||||| || |||
Sbjct 8235606 GTCGTAGATTATA 8235618
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671092866227480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |