Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04] 5,523 sequences; 169,378,599 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq5395 86.0 5e-12 seq5402 82.4 6e-11 >seq5395 Length=2659632 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214 || || || |||||||| || || || |||||||||||| || | | |||| || Sbjct 975777 ACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCGGACAGGGTGCGTCCGTCCTCC 975836 Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274 | || || || ||| | |||| ||| || ||||| || ||||| || ||||| Sbjct 975837 AGCTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGGATTCCCTCCTTGTCCTGG 975896 Query 15275 ATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTA 15334 || ||| ||| ||| | || ||||| ||| || || || | ||| ||||| || Sbjct 975897 ATCTTGGCCTTAACATTCTCGATGGTGTCGGAGGGCTCGACCTCAAGGGTGATGGTCTTG 975956 Query 15335 CCTGTCAGAGTTTTTACAAAAATTTGCATATT 15366 || ||||| || || || ||||||||||| || Sbjct 975957 CCAGTCAGGGTCTTCACGAAAATTTGCATGTT 975988 >seq5402 Length=10656099 Score = 82.4 bits (90), Expect = 6e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214 || || |||||||| || || || || |||||||| ||| || | | |||| || Sbjct 571657 ACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTACGTCCGTCCTCC 571716 Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274 | ||| ||||| ||| | |||| ||| || || || || || || || ||||| Sbjct 571717 AGTTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGGATGCCCTCCTTGTCCTGG 571776 Query 15275 ATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTA 15334 || ||| ||| ||| | || || || ||| || || || ||||||||||| ||| Sbjct 571777 ATCTTGGCCTTCACATTCTCAATCGTGTCGGAGGGCTCCACCTCCAAGGTAATGGTCTTA 571836 Query 15335 CCTGTCAGAGTTTTTACAAAAATTTGCATATTTGA 15369 || |||| || || ||||| || ||||| || || Sbjct 571837 CCAGTCAAGGTCTTCACAAAGATCTGCATTTTGGA 571871 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362154821152143