Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04]
5,523 sequences; 169,378,599 total letters
Query= NC_004778.3
Length=129593
Score E
Sequences producing significant alignments: (Bits) Value
seq5170 98.7 8e-16
>seq5170
Length=6624210
Score = 98.7 bits (108), Expect = 8e-16
Identities = 224/332 (67%), Gaps = 5/332 (2%)
Strand=Plus/Minus
Query 20948 CGATAATGCCGCAGCCCAGCCGGCCGCCCGAGTTGCCCGTAACCTTGCTAAGCGGGTGGT 21007
|||| | ||||||||| | ||| | || | ||| ||||| |||||| ||| ||||
Sbjct 512634 CGATGACGCCGCAGCCAATGCGGGCACCTGCGTTTCCCGTGGACTTGCTCAGCTCGTGGC 512575
Query 21008 CTGTTAAGCCGAGGTCATCGCGATCCGTGTGCACTACCAAGCTACGACCCAATATGCTGA 21067
| |||||| |||||| ||| | ||| || || | | | || || | ||||||
Sbjct 512574 CACCCTGGCCGAGATCATCGGCATCGGCGTGGACCACAACGGTGCGCCCGATGATGCTGT 512515
Query 21068 GCGGACCAAACAAGCTCATCACGTTGTCGCTCATGTCGACAGGCGTCAGCGCGGTGCAGC 21127
| || |||| | ||| |||| | |||| ||| || | | || ||
Sbjct 512514 CGGCGCCGAACAGCGTGATCTTCGAGTCGGTGATGTTGACCTTGGTGGGA-CAGTC--GC 512458
Query 21128 CCGCGGAGCGGACGTTGCCCAGATCGCCGACGTGCCGCTCTGCGGCGTCGGGAGCGCCGT 21187
| | || || ||||||||| || || | ||| || | || || ||||||| ||||
Sbjct 512457 CGGTGGCCTCGATGTTGCCCAGGTCTCCCAGGTGACGGTTCTCGTCGGCGGGAGCTCCGT 512398
Query 21188 GATTTTGGTGCGTAGGG-TTAAAGTGCTCGCCGGCGGACGTGCAGCCGTTGCTGGTGTCG 21246
| | | | ||||||| || |||||| |||| ||| ||||||||||| || ||||
Sbjct 512397 GCTCCTTGC-CGTAGGGATTGAAGTGCGGTCCGGACGACATGCAGCCGTTGGTGTTGTCC 512339
Query 21247 CCGAACTCGTGAACGTGAAAGCCGTGCAGTCC 21278
||||||||||| ||||| || |||||||| ||
Sbjct 512338 CCGAACTCGTGTACGTGGAATCCGTGCAGGCC 512307
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 414544894457062
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |