Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04]
5,523 sequences; 169,378,599 total letters
Query= NC_005262.3
Length=63882
Score E
Sequences producing significant alignments: (Bits) Value
seq1953 235 2e-57
>seq1953
Length=1017
Score = 235 bits (260), Expect = 2e-57
Identities = 428/613 (70%), Gaps = 15/613 (2%)
Strand=Plus/Plus
Query 13580 GCTTGGCATCCGCTCGGC-TGGAAGCCGGCGTGGTTCGCTGAGATCGAGAAATTCCCTAG 13638
|||||||| ||||||||| | ||||||| |||||||||| ||||||||| ||||| ||
Sbjct 11 GCTTGGCAACCGCTCGGCCTCGAAGCCG-CGTGGTTCGCCGAGATCGAGCCGTTCCCGAG 69
Query 13639 CGCCGTGCTGGCGCATCATTACCCCGATGTTCCTAACCTTGGAGACATGACGAAGATCAC 13698
||||||||| || || | ||||||| || || ||||| || |||||||| | |||| |
Sbjct 70 CGCCGTGCTCGCCCACCGTTACCCCCGCGTGCCCAACCTGGGCGACATGACCACGATCGC 129
Query 13699 GCGCGCGGTGCTGGCGCGTGAGGTCGAAGTGCCTGACGTGCTGGTCGGTGGCACGCCGTG 13758
||| ||| | || | || | ||| ||| | |||||||| |||||||||||
Sbjct 130 CCGCCAGGTCCGCGCCGGCACCGTGCCCGCGCCAGACCTCCTGGTCGGCGGCACGCCGTG 189
Query 13759 CCAGGCATTCAGCCTCGCGGGT---CTGCGTGAATCCCTCTCGGATGAGCGCGGGAATCT 13815
|||| | |||||| | || || | |||| ||| | || |||||| ||
Sbjct 190 CCAGTCGTTCAGCGTGGCCGGCGCCCGCCGTGG---CCTGGCTGACCCGCGCGGCGCCCT 246
Query 13816 TACTTTGAAATTCGTTGAGTTGATCGATGCAATTGACCATGTTCGGCGACTCGATGGCGC 13875
|| | | || ||| | |||| || ||||| || || | || ||
Sbjct 247 GACCCTTGCCTATGTGGAGCTTGCAAATGCCATCGACCAAACCCGCCGCCAAGACCGCCG 306
Query 13876 AGCACCGGCCGTCGTCGTCTGGGAAAACGTCCCCGGCGTCCTCT-CGACAAAAGACAATG 13934
| ||||| ||||||||||||||||||||||||||||| |||| || ||| |
Sbjct 307 CCCGCCGGCAACGCTCGTCTGGGAAAACGTCCCCGGCGTCCTCAGCGACCGCAG-CAACG 365
Query 13935 CGTTCGGGTGCTTTCTGGCTGGGCTTGCCGGAGAA-GATGAGCCGCTGGTCGCACCAGGG 13993
| ||||| ||| |||| | || ||||| ||| | | || ||| | | ||||||
Sbjct 366 CCTTCGGACACTTCCTGGGAGCACTGGCCGGCGAAAGCCGTGC-GCTCGAACCGCCAGGG 424
Query 13994 GGCCGGTGGGCGAACGCTGGTTGTGTGTATGGACCCCAGCGT-GCAGTCGCTTGGCGGAC 14052
|||||| |||| |||||||||| |||||||| ||| ||| |||| |||||
Sbjct 425 CAAAAATGGGCGCACGCAGGTTGTGTGTCTGGACCCCGGCGCCGCA-TCGCCTGGCGCTT 483
Query 14053 CCTGGACGCCCAATATTTCGGAGTGGCCCAACGCCGCCGCCGTGTGTTCGTTGTCGCAAG 14112
|| || || ||||||||||| || |||||||| ||||| || ||||| |||| |||||
Sbjct 484 GCTCGATGCTCAATATTTCGGCGTCGCCCAACGGCGCCGTCGCGTGTTTCTTGTGGCAAG 543
Query 14113 TGGTCGAGACTGGTTCGATCCCACACCGGTACTTTTTGAGTGGGATGGCGTGCGCCGGGA 14172
|||| ||| | |||||||| | ||||| ||||||| | ||| ||||| ||||
Sbjct 544 TGGTGGAGGTGGCGTCGATCCCGCCGAGGTAC-TTTTGAGCGCCCAGGCCTGCGCGGGGA 602
Query 14173 TTGTCCGCCGCGC 14185
|| | ||||| ||
Sbjct 603 TTCTTCGCCGGGC 615
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 204283848409329
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |