Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04]
5,523 sequences; 169,378,599 total letters
Query= NC_005336.1
Length=139962
Score E
Sequences producing significant alignments: (Bits) Value
seq5396 102 7e-17
>seq5396
Length=9561034
Score = 102 bits (112), Expect = 7e-17
Identities = 176/254 (69%), Gaps = 4/254 (2%)
Strand=Plus/Plus
Query 5240 CCGGTAGAACCGAATCCAGAGTCGCCGCGGTCGGTGTCGTCCAAGCGGTTAACCTCTTGA 5299
|| || || |||||||| ||||| || |||||||| |||| || ||| ||
Sbjct 2096105 CCCGTGGACCCGAATCCTCCCTCGCCACGTTCGGTGTCCTCCAGTTTGTCCACCAACTGC 2096164
Query 5300 ACTGCTGGGTGCGATATGCGTTCGCATATTAGCTGAGCTATCCTGTCTCCCTTCTTAACC 5359
| | | || | | ||||||||||| || | ||| || || | ||| || ||| |||
Sbjct 2096165 AGTTCCGGATAGAAGATGCGTTCGCAAATGAACTGGGCGATGCGGTCGCCGCGCTTCACC 2096224
Query 5360 TCAAAGTCGCTGTTTCCGA--AGTTAAACAGCACCACCCCGACATTGCCTCGGTAGTCTT 5417
||||| | || ||||| ||| ||||| || || |||| ||||| || ||||| |
Sbjct 2096225 TCAAA--CTCTACGTCCGAGTGGTTGAACAGGACGACTCCGAGGTTGCCGCGATAGTCCT 2096282
Query 5418 CGTCGATAACGCCAGCGCCCACGTCGATAAAGTGTTTGACCGCAAGGCCGGAACGTGGTG 5477
|||| | ||||| || ||||| ||||| |||| || || || || || || || || |
Sbjct 2096283 CGTCCACCACGCCGGCACCCACATCGATGAAGTTCTTCACGGCCAGCCCTGATCGCGGAG 2096342
Query 5478 CTATGCGTCCGTAG 5491
| | |||||||||
Sbjct 2096343 CCACTCGTCCGTAG 2096356
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 447719488431760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |