Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04]
5,523 sequences; 169,378,599 total letters
Query= NC_005337.1
Length=134431
Score E
Sequences producing significant alignments: (Bits) Value
seq5396 163 2e-35
>seq5396
Length=9561034
Score = 163 bits (180), Expect = 2e-35
Identities = 213/290 (73%), Gaps = 6/290 (2%)
Strand=Plus/Plus
Query 5501 ACGCCCGTGGACCCGAATCCGCCTGCGCCTCTTTCCGTATCGTCCAGGCACGCCACCTCT 5560
|||||||||||||||||||| || |||| | ||| || || ||||| |||||
Sbjct 2096102 ACGCCCGTGGACCCGAATCCTCCCTCGCCACGTTCGGTGTCCTCCAGTTTGTCCACCAAC 2096161
Query 5561 TCCACATCGGGGAACGCAG-CGCGCTCGCAGATCAGCTGCGCTATTCGGTCGCCCGTCTT 5619
| || || ||| | || ||| ||||| || | ||| || || |||||||| |||
Sbjct 2096162 TGCAGTTC-CGGATAGAAGATGCGTTCGCAAATGAACTGGGCGATGCGGTCGCCGCGCTT 2096220
Query 5620 TACCTCGAAATCGTTGTGGCCGA--AGTTGAACAGCACCACGCCCACGTTGCCGCGGTAG 5677
||||| || || | | |||| ||||||||| || || || | ||||||||| |||
Sbjct 2096221 CACCTCAAACTC--TACGTCCGAGTGGTTGAACAGGACGACTCCGAGGTTGCCGCGATAG 2096278
Query 5678 TCGGCGTCTATCACGCCCGCGCCCACGTCGATGAAGTGCTTGACCGCCAGGCCGGAGCGG 5737
|| |||| | |||||| || ||||| |||||||||| ||| || ||||| || || ||
Sbjct 2096279 TCCTCGTCCACCACGCCGGCACCCACATCGATGAAGTTCTTCACGGCCAGCCCTGATCGC 2096338
Query 5738 GGAGCCACGCGGCCGTAGCACCCATCGGGAAGCTGTATCTGCAGGTCCGT 5787
|||||||| || |||||| | || ||||||| ||| | |||||||| ||
Sbjct 2096339 GGAGCCACTCGTCCGTAGGAGCCCTCGGGAACCTGCACTTGCAGGTCGGT 2096388
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430025452366376
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |