Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04] 5,523 sequences; 169,378,599 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq5396 91.5 1e-13 >seq5396 Length=9561034 Score = 91.5 bits (100), Expect = 1e-13 Identities = 150/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 40784 GTTAAACAATATGACGCCGAGGTTGCCCCTGTAGTCGGGGTCCACCACCCCGGCACCGAC 40843 ||| |||| | ||| ||||||||||| | ||||| ||||||||| |||||||| || Sbjct 2096245 GTTGAACAGGACGACTCCGAGGTTGCCGCGATAGTCCTCGTCCACCACGCCGGCACCCAC 2096304 Query 40844 GTCTATAAAATTTTCCAGGGCCAGGCCGGACCTGGGAGCCACCCTGCCGTAGAGGCCCGG 40903 || || || || | || |||||| || || | |||||||| | |||||| |||| Sbjct 2096305 ATCGATGAAGTTCTTCACGGCCAGCCCTGATCGCGGAGCCACTCGTCCGTAGGAGCCCTC 2096364 Query 40904 GGGCATCTTTACGGCCAGGTCCGTCTTTACCAGGGCCCTGCCAAAGGAGGGGACCACGAC 40963 ||| | || || |||||| ||||| || | |||| | || || || ||||| | Sbjct 2096365 GGGAACCTGCACTTGCAGGTCGGTCTTCACGATGGCCTTTCCTCGGGCCGGCACCACCAG 2096424 Query 40964 CGGGTAAGCG-GCCGCTAGGTCGTAACCCGCGGC 40996 ||| ||| |||| ||||| |||||| || Sbjct 2096425 GTCGTAGGCGCTCCGC-AGGTCCACACCCGCCGC 2096457 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340114704806679