Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04] 5,523 sequences; 169,378,599 total letters Query= NC_006936.1 Length=36674 Score E Sequences producing significant alignments: (Bits) Value seq1912 111 4e-20 >seq1912 Length=1433 Score = 111 bits (122), Expect = 4e-20 Identities = 111/143 (78%), Gaps = 2/143 (1%) Strand=Plus/Minus Query 36446 ACAGATCGGTTATCGCTGTGGGCTAATTGGTAAGCTACAAAGGAATGCGGGTTCGAATCC 36505 ||||| ||| ||||| |||||||||||||||||| |||| || ||| ||||||| ||| Sbjct 1240 ACAGACTGGTAATCGCCGTGGGCTAATTGGTAAGCCACAATGGGATGTAGGTTCGAGTCC 1181 Query 36506 TGCCAGCGATATAGTTATGCAGCATGGCTACTCATGAGGGCTAAAACTGTATAACGTGTG 36565 | || ||||||| |||||| | || | ||| | | | || | |||||||||| Sbjct 1180 TACCGGCGATATTGTTATGTGATACAGCACCCAATGGGAGTT--GACCGCATAACGTGTG 1123 Query 36566 CTTGTGGTGGAATAGGTAGACGC 36588 ||||||| ||||||||||||||| Sbjct 1122 CTTGTGGCGGAATAGGTAGACGC 1100 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 117227511056136