Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04] 5,523 sequences; 169,378,599 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq4493 147 2e-30 seq5396 98.7 1e-15 seq5267 84.2 2e-11 >seq4493 Length=3184771 Score = 147 bits (162), Expect = 2e-30 Identities = 138/176 (78%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 71717 GAGGGTAAAATTCACGGATACCTACGCATGTACTGGGCCAAAAAGATTCTCGAGTGGACT 71776 ||||| || || ||||| | || ||||||||||||||||| ||||||||||||||||| Sbjct 604528 GAGGGCAAGATGCACGGCTTTCTGCGCATGTACTGGGCCAAGAAGATTCTCGAGTGGACC 604469 Query 71777 CAAACTCCCGAGCAGGCGCTCGAGTATTCTATTTATCTAAACGATAGATACAGTCTCGAC 71836 || || ||| ||||||| || ||| | || |||||||| | ||||| |||||| Sbjct 604468 GCCACCCCTGAGGAGGCGCTGGAATATGCGATCCTGCTAAACGACAAGTACAGCCTCGAC 604409 Query 71837 GGTCGCGATCCTAACGGTTATGTCGGTTGCATGTGGAGCATTTGCGGTCTTCACGA 71892 || |||||||| ||||| |||||||| ||||||||| |||| | || | ||||| Sbjct 604408 GGACGCGATCCCAACGGCTATGTCGGCTGCATGTGGTCCATTGGGGGAGTCCACGA 604353 >seq5396 Length=9561034 Score = 98.7 bits (108), Expect = 1e-15 Identities = 128/177 (72%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 147113 CACGGTGAATTGAATCGTGTTTGCTGCGGGTTTGGTTCTCAAATAGTACATGCCCGTTTT 147172 ||||||||| ||||| | |||||| || || || || | || |||||||| || ||||| Sbjct 8233764 CACGGTGAACTGAATGGCGTTTGCAGCTGGCTTTGTGCGCAGGTAGTACATTCCAGTTTT 8233823 Query 147173 TAAACCCTTTTCCCAAGAATAGTCGTGAATGGATGATAAAACTTTATAGGTTGGATTGGC 147232 | ||| || ||| |||||| ||| ||||| | | | |||| |||| | || Sbjct 8233824 GAGACCAGCTTTCCAGGAATAGAAGTGTATGGACGTGAGTTTTCCATAGTTTGGCTCTGC 8233883 Query 147233 CACAAAAAGATTGAGCGATTGGCTCTGATCGATGTAAGGTCCCCGCTCTGCGGCCAT 147289 |||| || |||| ||| || |||||||| ||| | | ||| || ||||||||||| Sbjct 8233884 CACATGAATGTTGAACGACTGACTCTGATCTATGAACGCTCCTCGATCTGCGGCCAT 8233940 >seq5267 Length=4296760 Score = 84.2 bits (92), Expect = 2e-11 Identities = 167/245 (68%), Gaps = 2/245 (1%) Strand=Plus/Plus Query 119626 TGGCCGCTCCGAACCGCTTGTACTCGCCCACACGTTTTTCaaaaaaaTTAGTCTTGCCCT 119685 ||||| |||| | |||| |||||||||||| || || || || || |||||||| | Sbjct 668441 TGGCCACTCCCATGCGCTGGTACTCGCCCACCTTCTTCTCGAAGAAGTTGGTCTTGCCGT 668500 Query 119686 CAAGAGATATGTTATTCATAAACTCGAAAGGATTTGCAGTGTTGAAATGCTTGTCGTAGC 119745 | || || || | | ||| || | ||| || || || ||| | |||| | || Sbjct 668501 CCAGCGAGATCATCTCCATGAAGTTGAAGGGGTTCTTGGTATTGTAGATCTTGCCAACGC 668560 Query 119746 CCAACTCGAACAACAGTCGATCTGCCACAAACTCGATGTATTCGCACATG-GATTGCGAA 119804 ||| ||| | || ||| ||||| ||||| || |||||||| | ||||| | | || || Sbjct 668561 CCAGCTCCACCAGCAGACGATCCGCCACGAATTCGATGTACTGCGACATGAGGTCGC-AA 668619 Query 119805 TTCATGCCCAACATAGCGACCGGTAAAGCATTGGTAAAGAAATCCTTTTCAATGTCGACC 119864 |||||||| | | || || || |||| ||| | ||| |||| || ||| | || Sbjct 668620 TTCATGCCGATGAGGTTTACGGGCAAGGCATCGGTGAGGAACTCCTGCTCTATGGCCACA 668679 Query 119865 GCTTC 119869 || || Sbjct 668680 GCATC 668684 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478629354344560