Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04]
5,523 sequences; 169,378,599 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq4493 147 2e-30
seq5396 98.7 1e-15
seq5267 84.2 2e-11
>seq4493
Length=3184771
Score = 147 bits (162), Expect = 2e-30
Identities = 138/176 (78%), Gaps = 0/176 (0%)
Strand=Plus/Minus
Query 71717 GAGGGTAAAATTCACGGATACCTACGCATGTACTGGGCCAAAAAGATTCTCGAGTGGACT 71776
||||| || || ||||| | || ||||||||||||||||| |||||||||||||||||
Sbjct 604528 GAGGGCAAGATGCACGGCTTTCTGCGCATGTACTGGGCCAAGAAGATTCTCGAGTGGACC 604469
Query 71777 CAAACTCCCGAGCAGGCGCTCGAGTATTCTATTTATCTAAACGATAGATACAGTCTCGAC 71836
|| || ||| ||||||| || ||| | || |||||||| | ||||| ||||||
Sbjct 604468 GCCACCCCTGAGGAGGCGCTGGAATATGCGATCCTGCTAAACGACAAGTACAGCCTCGAC 604409
Query 71837 GGTCGCGATCCTAACGGTTATGTCGGTTGCATGTGGAGCATTTGCGGTCTTCACGA 71892
|| |||||||| ||||| |||||||| ||||||||| |||| | || | |||||
Sbjct 604408 GGACGCGATCCCAACGGCTATGTCGGCTGCATGTGGTCCATTGGGGGAGTCCACGA 604353
>seq5396
Length=9561034
Score = 98.7 bits (108), Expect = 1e-15
Identities = 128/177 (72%), Gaps = 0/177 (0%)
Strand=Plus/Plus
Query 147113 CACGGTGAATTGAATCGTGTTTGCTGCGGGTTTGGTTCTCAAATAGTACATGCCCGTTTT 147172
||||||||| ||||| | |||||| || || || || | || |||||||| || |||||
Sbjct 8233764 CACGGTGAACTGAATGGCGTTTGCAGCTGGCTTTGTGCGCAGGTAGTACATTCCAGTTTT 8233823
Query 147173 TAAACCCTTTTCCCAAGAATAGTCGTGAATGGATGATAAAACTTTATAGGTTGGATTGGC 147232
| ||| || ||| |||||| ||| ||||| | | | |||| |||| | ||
Sbjct 8233824 GAGACCAGCTTTCCAGGAATAGAAGTGTATGGACGTGAGTTTTCCATAGTTTGGCTCTGC 8233883
Query 147233 CACAAAAAGATTGAGCGATTGGCTCTGATCGATGTAAGGTCCCCGCTCTGCGGCCAT 147289
|||| || |||| ||| || |||||||| ||| | | ||| || |||||||||||
Sbjct 8233884 CACATGAATGTTGAACGACTGACTCTGATCTATGAACGCTCCTCGATCTGCGGCCAT 8233940
>seq5267
Length=4296760
Score = 84.2 bits (92), Expect = 2e-11
Identities = 167/245 (68%), Gaps = 2/245 (1%)
Strand=Plus/Plus
Query 119626 TGGCCGCTCCGAACCGCTTGTACTCGCCCACACGTTTTTCaaaaaaaTTAGTCTTGCCCT 119685
||||| |||| | |||| |||||||||||| || || || || || |||||||| |
Sbjct 668441 TGGCCACTCCCATGCGCTGGTACTCGCCCACCTTCTTCTCGAAGAAGTTGGTCTTGCCGT 668500
Query 119686 CAAGAGATATGTTATTCATAAACTCGAAAGGATTTGCAGTGTTGAAATGCTTGTCGTAGC 119745
| || || || | | ||| || | ||| || || || ||| | |||| | ||
Sbjct 668501 CCAGCGAGATCATCTCCATGAAGTTGAAGGGGTTCTTGGTATTGTAGATCTTGCCAACGC 668560
Query 119746 CCAACTCGAACAACAGTCGATCTGCCACAAACTCGATGTATTCGCACATG-GATTGCGAA 119804
||| ||| | || ||| ||||| ||||| || |||||||| | ||||| | | || ||
Sbjct 668561 CCAGCTCCACCAGCAGACGATCCGCCACGAATTCGATGTACTGCGACATGAGGTCGC-AA 668619
Query 119805 TTCATGCCCAACATAGCGACCGGTAAAGCATTGGTAAAGAAATCCTTTTCAATGTCGACC 119864
|||||||| | | || || || |||| ||| | ||| |||| || ||| | ||
Sbjct 668620 TTCATGCCGATGAGGTTTACGGGCAAGGCATCGGTGAGGAACTCCTGCTCTATGGCCACA 668679
Query 119865 GCTTC 119869
|| ||
Sbjct 668680 GCATC 668684
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478629354344560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |