Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04]
5,523 sequences; 169,378,599 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq5396 196 1e-44
>seq5396
Length=9561034
Score = 196 bits (216), Expect = 1e-44
Identities = 562/862 (65%), Gaps = 2/862 (0%)
Strand=Plus/Minus
Query 363447 TGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGA 363506
||| || ||||| |||||||| ||||| || || || || |||||| | |||| | ||
Sbjct 8235528 TGAGCGTCCGCAACATATGTTGATGCGCGTGGCGATCGGAATCCATGGAGAGGATATAGA 8235469
Query 363507 TGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTGTATTCACGCACGCCACGCCAAC 363566
||| || | ||||| ||||| || | | || ||||| || || |||||||
Sbjct 8235468 TGCAGCCGTGGAAACTTATAACCTCTTGTCGGAGCGATACTTCACTCATGCGTCGCCAAC 8235409
Query 363567 AATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAA 363626
| | |||| || | || ||| |||| ||||| || || | | ||||
Sbjct 8235408 GCTTTTTGCCGCTGCCACAAATCGCCCGCAGCTGTCGTCTTGTTTCCTCTTGACCATGAC 8235349
Query 363627 GGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAA 363686
| ||| ||||||||||| || ||| | | | || | || || | || || |||
Sbjct 8235348 AGCCGACTCCATCGAGGGCATTTTTAAGTCCGTGGAGCAGTGCGCCATGATCTCGAAGTC 8235289
Query 363687 TGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGCACAGAACAGTTACATTCGCG 363745
|| ||||| ||||| | | || |||| | || ||| || || | ||| |||
Sbjct 8235288 GGCCGGCGGCATTGGACTTAACG-TCCATTGCATCCGAGCAAAGGGCACCTCGATTTGCG 8235230
Query 363746 GCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGA 363805
|||| || || ||||| |||||||||||| | | || || ||||| |||
Sbjct 8235229 GCACGAACGGCACTTCCAATGGCCTGGTTCCCATGTTGAGGGTCTTCAACAATGTGGCGC 8235170
Query 363806 GGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTC 363865
| || ||||| ||||| || || ||||| || || ||||| || || || |||||
Sbjct 8235169 GCTATGTCGATCAGGGAGGCGGCAAGCGTCCCGGTGCCTTTGCCATTTACCTGGAGCCCT 8235110
Query 363866 ATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGC 363925
|| | || | |||||||| || || || ||| ||||| || || ||||| |
Sbjct 8235109 GGCACTCGGACGTCTTTGAGTTCCTGGAACTTAAGAAGAACACCGGCAAGGAGGAGAATC 8235050
Query 363926 GTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGG 363985
| || || ||||||||||| || || ||| | | || | |||||||||||||| ||||
Sbjct 8235049 GCGCCCGCGATCTGTTCTACGCCCTGTGGATACCCGATCTCTTTATGAAGCGCGTCGAGG 8234990
Query 363986 CAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGGG 364045
| | |||||||||| | || || || |||| || || ||| |||||| ||||
Sbjct 8234989 CCAATGGAGATTGGTCACTAATGTGTCCGCATAAATGCCCTGGCCTTCACGATGTGTGGG 8234930
Query 364046 GTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACAA 364105
| || || | | | || || |||||||| ||||| || ||
Sbjct 8234929 GCGATGAATTCGAAAAGTTGTATGAGAAGTATGAGCAAGAGGGTCGTGCCAACCGAACGG 8234870
Query 364106 TTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCT 364165
|| || || | ||||| ||||| || || | ||| | || || |||| ||||
Sbjct 8234869 TTAAGGCTCAATCCTTGTGGTTCGCCATTATTGAGGCACAGGTCGAAACTGGAAACCCCT 8234810
Query 364166 ATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTC 364225
| ||| ||| || ||| | |||||| | ||| |||||||||| | | || || ||
Sbjct 8234809 ACATGCTGTTTAAGGATGCCTGCAACAGGAAGAGCAACCAGCAGAATGTCGGCACCATCA 8234750
Query 364226 AGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTAT 364285
|| |||||| | || || || || | || ||| || |||| ||||||| ||| || |
Sbjct 8234749 AGTGCAGCAACTTGTGCACAGAAATCGTGGAGTACTCCTCTCCGGACGAGATTGCAGTCT 8234690
Query 364286 GTAACCTTGCGTCGATCGCGCT 364307
| ||| | || || ||||| ||
Sbjct 8234689 GCAACTTGGCATCCATCGCCCT 8234668
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303261370218986
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |