Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04]
5,523 sequences; 169,378,599 total letters
Query= NC_007383.1
Length=134394
Score E
Sequences producing significant alignments: (Bits) Value
seq5402 91.5 1e-13
seq5396 86.0 5e-12
>seq5402
Length=10656099
Score = 91.5 bits (100), Expect = 1e-13
Identities = 148/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 23987 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGC 24046
||||||||| | ||||| || || || ||||| || | |||||| | || || ||| |
Sbjct 571869 CAAAATGCAGATCTTTGTGAAGACCTTGACTGGTAAGACCATTACCTTGGAGGTGGAGCC 571810
Query 24047 CAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106
| |||||| || ||| | || || ||||| ||||| || ||||| || || ||
Sbjct 571809 CTCCGACACGATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCAGA 571750
Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTA 24166
||| ||| | ||||| | || |||||||||||| || || | | | | | ||| ||
Sbjct 571749 TCAGCAGCGTCTGATCTTCGCCGGCAAGCAACTGGAGGACGGACGTACCCTGTCCGACTA 571690
Query 24167 TAACATTCAAAAAGAATCTACAATTCATTTAGT 24199
||||| || || || || || |||| || ||
Sbjct 571689 CAACATCCAGAAGGAGTCGACCCTTCACTTGGT 571657
>seq5396
Length=9561034
Score = 86.0 bits (94), Expect = 5e-12
Identities = 109/150 (73%), Gaps = 0/150 (0%)
Strand=Plus/Plus
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
|| || ||||| | |||||| |||||| ||||||||||| || ||||| |||||
Sbjct 8330911 GATACTATCGAAAATGTCAAAGCCAAGATTCAGGACAAAGAAGGAATTCCTCCAGATCAG 8330970
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
||| | ||||| | || |||||||| || ||||||| | | | | || || ||||||
Sbjct 8330971 CAGCGTCTGATCTTCGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCTGACTATAAC 8331030
Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTG 24200
||||| || || || || | || || |||
Sbjct 8331031 ATTCAGAAGGAGTCCACTTTGCACTTGGTG 8331060
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429907060336065
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |