Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04] 5,523 sequences; 169,378,599 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq5402 91.5 1e-13 seq5396 86.0 5e-12 >seq5402 Length=10656099 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 23987 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGC 24046 ||||||||| | ||||| || || || ||||| || | |||||| | || || ||| | Sbjct 571869 CAAAATGCAGATCTTTGTGAAGACCTTGACTGGTAAGACCATTACCTTGGAGGTGGAGCC 571810 Query 24047 CAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106 | |||||| || ||| | || || ||||| ||||| || ||||| || || || Sbjct 571809 CTCCGACACGATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCAGA 571750 Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTA 24166 ||| ||| | ||||| | || |||||||||||| || || | | | | | ||| || Sbjct 571749 TCAGCAGCGTCTGATCTTCGCCGGCAAGCAACTGGAGGACGGACGTACCCTGTCCGACTA 571690 Query 24167 TAACATTCAAAAAGAATCTACAATTCATTTAGT 24199 ||||| || || || || || |||| || || Sbjct 571689 CAACATCCAGAAGGAGTCGACCCTTCACTTGGT 571657 >seq5396 Length=9561034 Score = 86.0 bits (94), Expect = 5e-12 Identities = 109/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || || ||||| | |||||| |||||| ||||||||||| || ||||| ||||| Sbjct 8330911 GATACTATCGAAAATGTCAAAGCCAAGATTCAGGACAAAGAAGGAATTCCTCCAGATCAG 8330970 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | ||||| | || |||||||| || ||||||| | | | | || || |||||| Sbjct 8330971 CAGCGTCTGATCTTCGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCTGACTATAAC 8331030 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTG 24200 ||||| || || || || | || || ||| Sbjct 8331031 ATTCAGAAGGAGTCCACTTTGCACTTGGTG 8331060 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429907060336065