Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04]
5,523 sequences; 169,378,599 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq5396 347 2e-90
>seq5396
Length=9561034
Score = 347 bits (384), Expect = 2e-90
Identities = 1209/1878 (64%), Gaps = 24/1878 (1%)
Strand=Plus/Plus
Query 61840 CTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCC 61899
||| |||| ||||| ||||||| | || || || || || || |||||||||||
Sbjct 8233758 CTTATCCACGGTGAACTGAATGGCGTTTGCAGCTGGCTTTGTGCGCAGGTAGTACATTCC 8233817
Query 61900 CGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGG 61959
||||| ||||| |||| || || || || ||| ||||| ||| | ||
Sbjct 8233818 AGTTTTGAGACCAGCTTTCCAGGAATAGAAGTGTATGGACGTGAGTTTTCCATAGTTTGG 8233877
Query 61960 ATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGC 62019
||||| | ||| || || | || ||||| ||||| ||||| ||||| | ||||| ||
Sbjct 8233878 CTCTGCCACATGAATGTTGAACGACTGACTCTGATCTATGAACGCTCCTCGATCTGCGGC 8233937
Query 62020 CATTTTTATAATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAAC-TCGCTTAATAT 62078
||| || || ||| ||| || |||||||| | ||||| || | |||| | |
Sbjct 8233938 CATCTTAATGGTCGACTTCACTGAGATTTCCCACACTGTTTTGTACAGATCGCGGACCTT 8233997
Query 62079 CTTCTGGAAGGTTTG--TATTCTGAATGGATCCACCATCTGCCA-TAATCCTATTCTTGA 62135
|| ||| || | ||||||| || || || || ||| | | || ||||| |
Sbjct 8233998 CTGGGGGATGGCCTCAATATTCTGGATTGAGCC-CCTGCTGGAAATGATTTGGTTCTTCA 8234056
Query 62136 TCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTT 62195
| || || | ||| || | ||| |||| | || | | ||| | ||||| ||||
Sbjct 8234057 TGTCGTCGTCCCACAAGTCCAGCTCCGTTAGGTCCCTTAACAAATGATGGTTAACCACTT 8234116
Query 62196 GAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACT 62255
| ||||| ||||||| |||| || || |||||||| | || ||||| || | ||| |
Sbjct 8234117 GGAATTCGCCAGACAGAACTCGCCTGGTATAAATATTCGTTGTGTACGGCTCGAAAGATT 8234176
Query 62256 CATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTAT 62315
| || || |||| |||||| ||||| || ||||| |||||||| || ||||| | |
Sbjct 8234177 CGTTGTTGCCCATAATTTGGGCAGTGGACGCAGTGGGCATAGGCGCAACCAACAGGGAGT 8234236
Query 62316 TTCTAAGACCGTA-TGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGAC 62374
| | | ||||| || | |||| || || || | ||| | |||||| | | |
Sbjct 8234237 TCCGGACACCGTGCTGCT-TGATGGACTCCTTCAGTTTCTGCCAGTCCCAAAGGTTTGTC 8234295
Query 62375 GGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATAT 62434
|| || || ||||| || || || || ||| ||||
Sbjct 8234296 GGCACTTTGTCCCACATGTCGTACTGCAGAATGCCTTTGCTCACGGGACTTCCCTCATAG 8234355
Query 62435 GTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAA 62494
|| || ||||| || || ||| || ||||||||||| || || | || ||||| ||
Sbjct 8234356 GTTTCATATGGGCCGTCGATCTGGGCCAGTTCACAACTGGCTTCCAGGGCGCCGTAGTAG 8234415
Query 62495 ATGGTTTCGAAGATCTTCTTATTTA-GATCTTGCGCTTCCAGGCTATCAAATGGATAATT 62553
||||||||||| |||| || ||| | || | ||||| || ||| | || ||
Sbjct 8234416 ATGGTTTCGAATATCTGCTGATTCAAGAGACCG-GCTTCTTCACTTTCATAGGGGAAACG 8234474
Query 62554 TAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTT 62613
| ||||| | ||||| || ||||| || ||||| || || | || | ||| |||
Sbjct 8234475 CATAAGAATTAGGGCGTCAGCGAATCCCTGGACACCGATGCCCACGGGACGATGCCTCAA 8234534
Query 62614 ATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATT 62673
|| || | | || ||||| | || || | || ||||| || || || || |||||
Sbjct 8234535 GTTGGATTTCTTTGCCTCTGGCAGGGGGTAGAAGTTTATATCGATGATCTTGTTAAGATT 8234594
Query 62674 TCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCCCATCTA---T 62730
|| || ||| || ||||| ||||| ||||| || | || |
Sbjct 8234595 CTTGGTAACCGTCTTGGTAACTTCCTTAAGTTTCTTGAAATCGTATGTCTTCTCGGGAGT 8234654
Query 62731 TACAAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGC 62790
|| |||||||| | || | ||||||| || || || || | ||| | | | |
Sbjct 8234655 GACGAACATGTTGAGGGCGATGGATGCCAAGTTGCAGACTGCAATCTCGTCCGGAGAGGA 8234714
Query 62791 ATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATT 62850
|| | | || || ||||| | || || ||||||||||| || | ||| || || ||
Sbjct 8234715 GTACTCCACGATTTCTGTGCACAAGTTGCTGCACTTGATGGTGCCGACATTCTGCTGGTT 8234774
Query 62851 ACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGA 62910
||||| |||| || ||||||||| | || ||| | || | |||||||| | ||| |
Sbjct 8234775 GCTCTTCCTGTTGCAGGCATCCTTAAACAGCATGTAGGGGTTTCCAGTTTCGACCTGTGC 8234834
Query 62911 TTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCTTTTCTCT 62970
|| ||||| || ||| | | | ||||||| | | ||| | | ||||
Sbjct 8234835 CTCAATAATGGCGAACCACAAGGATTGAGCCTTAACCGTTCGGTTGG--CACGACCCTCT 8234892
Query 62971 TTCGTATAGTGT--ATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGA 63028
| | ||| | |||||| |||||| || || ||||| |||| || || |||||
Sbjct 8234893 TGCTCATACTTCTCATACAACTTTTCGAATTCATCGCCCCACACATCGTGAAGGCCAGGG 8234952
Query 63029 CATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGA 63088
|||| || ||||||||| | ||||| ||||| | ||| || || ||||||||||||
Sbjct 8234953 CATTTATGCGGACACATTAGTGACCAATCTCCATTGGCCTCGACGCGCTTCATAAAGAGA 8235012
Query 63089 TCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTC 63148
|| || ||||| || || || ||||| | || | || ||||| || || || |||
Sbjct 8235013 TCGGGTATCCACAGGGCGTAGAACAGATCGCGGGCGCGATTCTCCTCCTTGCCGGTGTTC 8235072
Query 63149 TTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATA 63208
|| ||||| || |||||| | | | || || ||||| || |||| ||| ||||| |
Sbjct 8235073 TTCTTAAGTTCCAGGAACTCAAAGACGTCCGAGTGCCAGGGCTCCAGGTAAATGGCAAAG 8235132
Query 63209 ACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTC 63268
| || || || ||| ||||||||||| | || | || || || | || |||
Sbjct 8235133 GCACCGGGACGCTTGCCGCCTCCCTGATCGACATAGCGCGCCACATTGTTGAAGACCCTC 8235192
Query 63269 AACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCA 63328
||||| |||| | |||||||| || || || || || | || || | || | ||
Sbjct 8235193 AACATGGGAACCAGGCCATTGGAAGTGCCGTTCGTGCCGCAAATCGAGGTGCCCTTTGCT 8235252
Query 63329 CGAATATTACTAATTGA----TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCA 63384
|| || ||| || || || || || || ||| || ||||| | |||||
Sbjct 8235253 CGGAT----GCAATGGACGTTAAGTCCAATGCCGCCGGCCGACTTCGAGATCATGGCGCA 8235308
Query 63385 TCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACA 63444
| | | | | | | |||||||| || || | ||||| | | || |||||
Sbjct 8235309 CTGCTCCACGGACTTAAAAATGCCCTCGATGGAGTCGGCTGTCATGGTCAAGAGGAAACA 8235368
Query 63445 GCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAA 63504
|||| || | ||| | || | || ||| | || || || || ||||| ||
Sbjct 8235369 AGACGACAGCTGCGGGCGATTTGTGGCAGCGGCAAAAAGCGTTGGCGACGCATGAGTGAA 8235428
Query 63505 CCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAAT 63564
|| || || | || || || || || | |||| ||||||||| | ||| ||
Sbjct 8235429 GTATCGCTCCGACAAGAGGTTATAAGTTTCCACGGCTGCATCTATATCCTCTCCATGGAT 8235488
Query 63565 TCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTT 63624
||| | || || ||||| ||||| || || || | ||| |||| || |||| | ||
Sbjct 8235489 TCCGATCGCCACGCGCATCAACATATGTTGCGGACGCTCAGCGATTTTTCCGTTTCTCTT 8235548
Query 63625 CAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTC 63684
|| || ||||| ||| | || || || ||||||||||| || |||||| || ||
Sbjct 8235549 CAGCAGATAGGAACGTTCGAGGGTCTTGAACCCAAAATAGTTATACCCAAAGTCGCGGTC 8235608
Query 63685 GTAAATAATAACCGAGTT 63702
||| || ||| |||||
Sbjct 8235609 GTAGATTATAGAAGAGTT 8235626
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633588255630800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |